RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 OR10A7Q8NGE5 316 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 CT45A3Q8NHU0 189 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 LINC01560Q8TB33 94 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 FAM222BQ8WU58 562 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 LHX4Q969G2 390 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 TVP23CQ96ET8 276 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 SDSLQ96GA7 329 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZNF714Q96N38 554 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 WFIKKN1Q96NZ8 548 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 OR4C12Q96R67 309 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 NIPSNAP3BQ9BS92 247 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 HINT2Q9BX68 163 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ACTR3CQ9C0K3 210 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 MAP1LC3BQ9GZQ8 125 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 SAV1Q9H4B6 383 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 NCOR1P1Q9H4R4 102 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 VSIRQ9H7M9 311 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 SLC25A22Q9H936 323 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 BIN3Q9NQY0 253 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 TMEM106BQ9NUM4 274 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZNF835Q9Y2P0 537 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 TIMM9Q9Y5J7 89 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZNF407Q9C0G0 2248 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 FREM1Q5H8C1 2179 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 ESPL1Q14674 2120 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 IGHV1-69-2A0A0G2JMI3 117 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 CTXND1A0A1B0GTU2 59 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 ZNF727A8MUV8 499 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 E7EQL1 145 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 H3BQ15 152 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 HMGB3O15347 200 aaKnown RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 RBFOX2O43251 390 aaKnown RBP eCLIP2.27□□□□□ -2.05
CALD1-221ENST00000489019 PPIHO43447 177 aaKnown RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 ENSAO43768 121 aaKnown RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 CLN5O75503 358 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 MT-CO2P00403 227 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 ARG1P05089 322 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 BCL2P10415 239 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 CCL3L1P16619 93 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 NPY1RP25929 384 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 CD1BP29016 333 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 FCGR2BP31994 310 aaPredicted RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 AKR1D1P51857 326 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 ERHP84090 104 aaKnown RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 RAB31Q13636 194 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 KIAA1644Q3SXP7 199 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 SMUG1Q53HV7 270 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 FAM159AQ6UWV7 190 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 LYPD2Q6UXB3 125 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 COX8CQ7Z4L0 72 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 TGIF2LYQ8IUE0 185 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 CYB561D1Q8N8Q1 229 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 ST6GALNAC3Q8NDV1 305 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 OR5T1Q8NG75 326 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 OR13D1Q8NGV5 346 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 OR10X1Q8NGY0 326 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 OR4F5Q8NH21 305 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 OR52E5Q8NH55 327 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 CLDND2Q8NHS1 167 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 CA5BP1Q8WTZ4 195 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 PHLDA1Q8WV24 401 aaPredicted RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 MBD3L1Q8WWY6 194 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 RNASE6Q93091 150 aaKnown RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 ISOC2Q96AB3 205 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 OR4F4Q96R69 305 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 P2RX4Q99571 388 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 AGMATQ9BSE5 352 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 NPCDR1Q9BY65 106 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 IFI27L2Q9H2X8 130 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 PLEKHA3Q9HB20 300 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 NPVFQ9HCQ7 196 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 MANBALQ9NQG1 85 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 KCNIP2Q9NS61 270 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 RPRMQ9NS64 109 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 FKBP11Q9NYL4 201 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 VAX2Q9UIW0 290 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 RPUSD1Q9UJJ7 312 aaKnown RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 PRNDQ9UKY0 176 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 OR51B2Q9Y5P1 312 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 LINC00312Q9Y6C7 94 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 PCNX2A6NKB5 2137 aa2.27□□□□□ -2.05
CALD1-221ENST00000489019 RAI1Q7Z5J4 1906 aaPredicted RBP2.27□□□□□ -2.05
CALD1-221ENST00000489019 PRUNE2Q8WUY3 3088 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 TRAV3A0A0B4J244 114 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 TRAV1-1A0A0B4J248 108 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 A0A1W2PN81 502 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 XKRY2A2RUG3 117 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 C15orf61A6NNL5 157 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 B4DEV8 164 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 SHISA9B4DS77 424 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 UPK2O00526 184 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 CHEK1O14757 476 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 NDUFA2O43678 99 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 SOX15O60248 233 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 MPDU1O75352 247 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 EIF3GO75821 320 aaKnown RBP eCLIP2.26□□□□□ -2.05
CALD1-221ENST00000489019 MMP23AO75900 390 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 KBTBD11O94819 623 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 CXorf1O96002 111 aa2.26□□□□□ -2.05
CALD1-221ENST00000489019 CA2P00918 260 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms