RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SLC38A11Q08AI6 406 aa8.69□□□□□ -1.02
COL21A1-211ENST00000488912 AWAT1Q58HT5 328 aa8.69□□□□□ -1.02
COL21A1-211ENST00000488912 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
COL21A1-211ENST00000488912 C22orf15Q8WYQ4 148 aa8.69□□□□□ -1.02
COL21A1-211ENST00000488912 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 MDFIC2A0A1B0GVS7 189 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 A0A1W2PN81 502 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 IGLC7A0M8Q6 106 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 APELAP0DMC3 54 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 CHRNA7P36544 502 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 EIF5AP63241 154 aaKnown RBP8.68□□□□□ -1.02
COL21A1-211ENST00000488912 GAGE1Q13065 139 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 ZNF266Q14584 549 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 RHEBQ15382 184 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 BSXQ3C1V8 233 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 BCL6BQ8N143 479 aaPredicted RBP8.68□□□□□ -1.02
COL21A1-211ENST00000488912 Q8N9W7 124 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 OR10P1Q8NGE3 313 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 SRSF12Q8WXF0 261 aaKnown RBP8.68□□□□□ -1.02
COL21A1-211ENST00000488912 SCRT1Q9BWW7 348 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 REG1AP05451 166 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 SULT1A2P50226 295 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 COTL1Q14019 142 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 LRRC75BQ2VPJ9 315 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 TMEM219Q86XT9 240 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 FAM24BQ8N5W8 94 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 HSD17B11Q8NBQ5 300 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 ISOC2Q96AB3 205 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 ARV1Q9H2C2 271 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 DOK5Q9P104 306 aa8.68□□□□□ -1.02
COL21A1-211ENST00000488912 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
COL21A1-211ENST00000488912 TEX22C9J3V5 150 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 H3BUX3 64 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 DFFBO76075 338 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 CNIH1O95406 144 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 LINC00614P0C842 121 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 OR13C7P0DN81 318 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 RNASE2P10153 161 aaKnown RBP8.67□□□□□ -1.02
COL21A1-211ENST00000488912 AREGP15514 252 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 SNCAP37840 140 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 RAB11AP62491 216 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 ERHP84090 104 aaKnown RBP8.67□□□□□ -1.02
COL21A1-211ENST00000488912 PINX1Q96BK5 328 aaKnown RBP8.67□□□□□ -1.02
COL21A1-211ENST00000488912 PRO1933Q9H354 126 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 PARP11Q9NR21 331 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 C1RLQ9NZP8 487 aa8.67□□□□□ -1.02
COL21A1-211ENST00000488912 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 NDPQ00604 133 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 KRTAP1-1Q07627 177 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 FXYD3Q14802 87 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 DEFB112Q30KQ8 113 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 HIST3H2BBQ8N257 126 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 SSMEM1Q8WWF3 244 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 GINS3Q9BRX5 216 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 SLC25A33Q9BSK2 321 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 FAM103A1Q9BTL3 118 aaKnown RBP8.66□□□□□ -1.02
COL21A1-211ENST00000488912 SH3BGRL3Q9H299 93 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 NDUFA6P56556 154 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 CX3CL1P78423 397 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 RUNX1Q01196 453 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 USF2Q15853 346 aaPredicted RBP8.66□□□□□ -1.02
COL21A1-211ENST00000488912 C2orf83Q53S99 150 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 C19orf35Q6ZS72 473 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 RFNGQ9Y644 331 aa8.66□□□□□ -1.02
COL21A1-211ENST00000488912 AGPAT2O15120 278 aa8.65□□□□□ -1.02
COL21A1-211ENST00000488912 LY6EQ16553 131 aa8.65□□□□□ -1.02
COL21A1-211ENST00000488912 SLC25A24Q6NUK1 477 aa8.65□□□□□ -1.02
COL21A1-211ENST00000488912 ZNF562Q6V9R5 426 aa8.65□□□□□ -1.02
COL21A1-211ENST00000488912 P2RX4Q99571 388 aa8.65□□□□□ -1.02
COL21A1-211ENST00000488912 TMEM147Q9BVK8 224 aa8.65□□□□□ -1.02
COL21A1-211ENST00000488912 OTOGQ6ZRI0 2925 aa8.65□□□□□ -1.02
COL21A1-211ENST00000488912 IGHV7-81A0A0B4J1V7 117 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 SH2D7A6NKC9 451 aaPredicted RBP8.65□□□□□ -1.03
COL21A1-211ENST00000488912 SCAF4O95104 1147 aaKnown RBP8.65□□□□□ -1.03
COL21A1-211ENST00000488912 IFNA5P01569 189 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 HLA-DRB1P01911 266 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 ATP6V0CP27449 155 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 ATP6V1FQ16864 119 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 VWC2Q2TAL6 325 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 KHDC3LQ587J8 217 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 SAPCD1Q5SSQ6 148 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 C9orf139Q6ZV77 190 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 COMMD1Q8N668 190 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 C5orf56Q8N8D9 126 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 ARPC1AQ92747 370 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 RASL11BQ9BPW5 248 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 HSPB9Q9BQS6 159 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 MOB4Q9Y3A3 225 aa8.65□□□□□ -1.03
COL21A1-211ENST00000488912 DLEU1O43261 78 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 ATP5IP56385 69 aaPredicted RBP8.64□□□□□ -1.03
COL21A1-211ENST00000488912 IL17RELQ6ZVW7 336 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
COL21A1-211ENST00000488912 ZNF114Q8NC26 417 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 SVIPQ8NHG7 77 aa8.64□□□□□ -1.03
COL21A1-211ENST00000488912 WDR61Q9GZS3 305 aaKnown RBP8.64□□□□□ -1.03
COL21A1-211ENST00000488912 GOLT1BQ9Y3E0 138 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms