RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 HTR2BP41595 481 aa13.07□□□□□ -0.32
ATG3-205ENST00000488910 TMEM116Q8NCL8 245 aa13.07□□□□□ -0.32
ATG3-205ENST00000488910 TRIM63Q969Q1 353 aa13.07□□□□□ -0.32
ATG3-205ENST00000488910 ZNF414Q96IQ9 312 aa13.07□□□□□ -0.32
ATG3-205ENST00000488910 HIPK2Q9H2X6 1198 aa13.07□□□□□ -0.32
ATG3-205ENST00000488910 TRAV14DV4A0A0A6YYC5 116 aa13.06□□□□□ -0.32
ATG3-205ENST00000488910 IGHV7-4-1A0A0J9YVY3 117 aa13.06□□□□□ -0.32
ATG3-205ENST00000488910 TMEM50AO95807 157 aa13.06□□□□□ -0.32
ATG3-205ENST00000488910 ANXA3P12429 323 aa13.06□□□□□ -0.32
ATG3-205ENST00000488910 SRPXP78539 464 aa13.06□□□□□ -0.32
ATG3-205ENST00000488910 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
ATG3-205ENST00000488910 HEYLQ9NQ87 328 aaPredicted RBP13.06□□□□□ -0.32
ATG3-205ENST00000488910 A0A0B4J2A0 478 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 CHEK1O14757 476 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 SCGB2A1O75556 95 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 SULT1A3P0DMM9 295 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 SULT1A4P0DMN0 295 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 OPRK1P41145 380 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 SUPT4H1P63272 117 aaKnown RBP13.05□□□□□ -0.32
ATG3-205ENST00000488910 ZNF79Q15937 498 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 SPANXN2Q5MJ10 180 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 TOMM20LQ6UXN7 152 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 LGI3Q8N145 548 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 OR4X1Q8NH49 305 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 SLC25A21Q9BQT8 299 aaPredicted RBP13.05□□□□□ -0.32
ATG3-205ENST00000488910 RHPN1-AS1Q9BWJ2 59 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 EDA2RQ9HAV5 297 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 SHPKQ9UHJ6 478 aa13.05□□□□□ -0.32
ATG3-205ENST00000488910 RPS10-NUDT3A0A1W2PQS6 291 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 CEBPZOSA8MTT3 80 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 CLN5O75503 358 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 CD5P06127 495 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 BMI1P35226 326 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 CCR6P51684 374 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 C2orf83Q53S99 150 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 NMSQ5H8A3 153 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 NOXA1Q86UR1 476 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 FAM110AQ9BQ89 295 aa13.04□□□□□ -0.32
ATG3-205ENST00000488910 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
ATG3-205ENST00000488910 TRAV30A0A087WSZ9 112 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
ATG3-205ENST00000488910 LYL1P12980 280 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
ATG3-205ENST00000488910 SMCO1Q147U7 214 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 MLANAQ16655 118 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 TMEM128Q5BJH2 165 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 CASC10Q5T4H9 136 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
ATG3-205ENST00000488910 RNF2Q99496 336 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 GGTLC1Q9BX51 225 aa13.03□□□□□ -0.32
ATG3-205ENST00000488910 PUS1Q9Y606 427 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATG3-205ENST00000488910 SLC25A4P12235 298 aa13.02□□□□□ -0.33
ATG3-205ENST00000488910 LYZL2Q7Z4W2 148 aa13.02□□□□□ -0.33
ATG3-205ENST00000488910 TMED4Q7Z7H5 227 aa13.02□□□□□ -0.33
ATG3-205ENST00000488910 SLC24A4Q8NFF2 622 aa13.02□□□□□ -0.33
ATG3-205ENST00000488910 PRR13Q9NZ81 148 aa13.02□□□□□ -0.33
ATG3-205ENST00000488910 A0A1B0GU03 582 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 DUXBA0A1W2PPF3 345 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 TNFRSF9Q07011 255 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 FAM90A2PQ658T7 463 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 SRRQ9GZT4 340 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 VSIRQ9H7M9 311 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 ZFAND3Q9H8U3 227 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 MRPL36Q9P0J6 103 aaKnown RBP13.01□□□□□ -0.33
ATG3-205ENST00000488910 HSPB7Q9UBY9 170 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 U3KQ87 197 aa13.01□□□□□ -0.33
ATG3-205ENST00000488910 IGHV3-49A0A0A0MS15 119 aa13□□□□□ -0.33
ATG3-205ENST00000488910 NPPCP23582 126 aa13□□□□□ -0.33
ATG3-205ENST00000488910 ATP5IP56385 69 aaPredicted RBP13□□□□□ -0.33
ATG3-205ENST00000488910 PAFAH1B2P68402 229 aa13□□□□□ -0.33
ATG3-205ENST00000488910 RETNQ9HD89 108 aa13□□□□□ -0.33
ATG3-205ENST00000488910 UBQLN2Q9UHD9 624 aa13□□□□□ -0.33
ATG3-205ENST00000488910 A0A1W2PS18 150 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 IGKV1-17P01599 117 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 NPY1RP25929 384 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 ODF3L2Q3SX64 289 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 PRSS54Q6PEW0 395 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 LRTM2Q8N967 370 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 TMEM231Q9H6L2 316 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 NDUFA13Q9P0J0 144 aa12.99□□□□□ -0.33
ATG3-205ENST00000488910 IGHV3OR16-13A0A075B7E8 117 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 IGHV3-74A0A0B4J1X5 117 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 NAP1L6A6NFF2 107 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 NXPH3O95157 252 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 IFNA10P01566 189 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 SLC25A6P12236 298 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 VAMP1P23763 118 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 INPP1P49441 399 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 APOC4P55056 127 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 OR1S2Q8NGQ3 325 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 DTD1Q8TEA8 209 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 TMEM170AQ8WVE7 144 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 METTL26Q96S19 204 aa12.98□□□□□ -0.33
ATG3-205ENST00000488910 RBKSQ9H477 322 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms