RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 OR4C12Q96R67 309 aa14.16□□□□□ -0.14
PTCD3-217ENST00000488801 ZC4H2Q9NQZ6 224 aa14.16□□□□□ -0.14
PTCD3-217ENST00000488801 C15orf62A8K5M9 175 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 NDUFA4O00483 81 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 SYNGR2O43760 224 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 MED6O75586 246 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 IFNA21P01568 189 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 EDN2P20800 178 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 OPRK1P41145 380 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 Q56UQ5 140 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 OR4X1Q8NH49 305 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 ZMAT5Q9UDW3 170 aaKnown RBP14.15□□□□□ -0.14
PTCD3-217ENST00000488801 TGP01266 2768 aa14.15□□□□□ -0.14
PTCD3-217ENST00000488801 WI2-2373I1.2A0A1W2PRP0 233 aa14.14□□□□□ -0.15
PTCD3-217ENST00000488801 K7EIL1 84 aa14.14□□□□□ -0.15
PTCD3-217ENST00000488801 C8orf88P0DMB2 117 aa14.14□□□□□ -0.15
PTCD3-217ENST00000488801 ELLP55199 621 aaPredicted RBP14.14□□□□□ -0.15
PTCD3-217ENST00000488801 FAM106AQ4KMX7 169 aa14.14□□□□□ -0.15
PTCD3-217ENST00000488801 NOXA1Q86UR1 476 aa14.14□□□□□ -0.15
PTCD3-217ENST00000488801 HAPLN4Q86UW8 402 aa14.14□□□□□ -0.15
PTCD3-217ENST00000488801 C12orf45Q8N5I9 185 aaPredicted RBP14.14□□□□□ -0.15
PTCD3-217ENST00000488801 ZBTB8BQ8NAP8 495 aaPredicted RBP14.14□□□□□ -0.15
PTCD3-217ENST00000488801 UBAC2Q8NBM4 344 aa14.14□□□□□ -0.15
PTCD3-217ENST00000488801 PRSS46E5RG02 174 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 CLN5O75503 358 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 IAPPP10997 89 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 NPBWR1P48145 328 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 MLANAQ16655 118 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 IAH1Q2TAA2 248 aaPredicted RBP14.13□□□□□ -0.15
PTCD3-217ENST00000488801 PRSS54Q6PEW0 395 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 TMEM116Q8NCL8 245 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 CIB3Q96Q77 187 aaPredicted RBP14.13□□□□□ -0.15
PTCD3-217ENST00000488801 MAGT1Q9H0U3 335 aa14.13□□□□□ -0.15
PTCD3-217ENST00000488801 ZNF256Q9Y2P7 627 aaPredicted RBP14.13□□□□□ -0.15
PTCD3-217ENST00000488801 RCL1Q9Y2P8 373 aaKnown RBP14.13□□□□□ -0.15
PTCD3-217ENST00000488801 IGHV3-35A0A0C4DH35 117 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 RPS10-NUDT3A0A1W2PQS6 291 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 INMT-MINDY4F8WBC2 141 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 CCSO14618 274 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 NUPL2O15504 423 aaKnown RBP14.12□□□□□ -0.15
PTCD3-217ENST00000488801 GNG7O60262 68 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 PRAF2O60831 178 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 LY86O95711 162 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 TMEM50AO95807 157 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 IFNA10P01566 189 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 SLC25A4P12235 298 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 NKX2-1P43699 371 aaPredicted RBP14.12□□□□□ -0.15
PTCD3-217ENST00000488801 CD69Q07108 199 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 OR2K2Q8NGT1 345 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 PALMDQ9NP74 551 aa14.12□□□□□ -0.15
PTCD3-217ENST00000488801 SNRPGP15A8MWD9 76 aa14.11□□□□□ -0.15
PTCD3-217ENST00000488801 IGKV1-17P01599 117 aa14.11□□□□□ -0.15
PTCD3-217ENST00000488801 FOLR2P14207 255 aa14.11□□□□□ -0.15
PTCD3-217ENST00000488801 SPNP16150 400 aa14.11□□□□□ -0.15
PTCD3-217ENST00000488801 POLR2GP62487 172 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTCD3-217ENST00000488801 RELQ04864 619 aaPredicted RBP14.11□□□□□ -0.15
PTCD3-217ENST00000488801 IL15RAQ13261 267 aa14.11□□□□□ -0.15
PTCD3-217ENST00000488801 CACNG8Q8WXS5 425 aa14.11□□□□□ -0.15
PTCD3-217ENST00000488801 K7EMT4 169 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 PTTG1O95997 202 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 IGLC1P0CG04 106 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 CBLN1P23435 193 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 TM4SF20Q53R12 229 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 ETFRF1Q6IPR1 90 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 SLC16A13Q7RTY0 426 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 MARC2Q969Z3 335 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 PRR25Q96S07 402 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 ZFAND3Q9H8U3 227 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 DAZ1Q9NQZ3 744 aaKnown RBP14.1□□□□□ -0.15
PTCD3-217ENST00000488801 UFC1Q9Y3C8 167 aa14.1□□□□□ -0.15
PTCD3-217ENST00000488801 ZNF320A2RRD8 509 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 WRBO00258 174 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 GP9P14770 177 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 GPX4P36969 197 aaPredicted RBP14.09□□□□□ -0.15
PTCD3-217ENST00000488801 RND2P52198 227 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 PAX9P55771 341 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 DEFB114Q30KQ6 69 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 C11orf1Q9H5F2 150 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 GPN1Q9HCN4 374 aaPredicted RBP14.09□□□□□ -0.15
PTCD3-217ENST00000488801 TECRQ9NZ01 308 aaKnown RBP14.09□□□□□ -0.15
PTCD3-217ENST00000488801 MRPL27Q9P0M9 148 aaKnown RBP14.09□□□□□ -0.15
PTCD3-217ENST00000488801 MLXQ9UH92 298 aa14.09□□□□□ -0.15
PTCD3-217ENST00000488801 LSM4Q9Y4Z0 139 aaKnown RBP14.09□□□□□ -0.15
PTCD3-217ENST00000488801 C7orf66A4D0T2 115 aa14.08□□□□□ -0.16
PTCD3-217ENST00000488801 IZUMO1RA6ND01 250 aa14.08□□□□□ -0.16
PTCD3-217ENST00000488801 PMS2P5A8MQ11 134 aa14.08□□□□□ -0.16
PTCD3-217ENST00000488801 MBPP02686 304 aaPredicted RBP14.08□□□□□ -0.16
PTCD3-217ENST00000488801 ZNF600Q6ZNG1 722 aa14.08□□□□□ -0.16
PTCD3-217ENST00000488801 SMIM8Q96KF7 97 aa14.08□□□□□ -0.16
PTCD3-217ENST00000488801 COL7A1Q02388 2944 aa14.08□□□□□ -0.16
PTCD3-217ENST00000488801 DNAH9Q9NYC9 4486 aa14.07□□□□□ -0.16
PTCD3-217ENST00000488801 TRAV30A0A087WSZ9 112 aa14.07□□□□□ -0.16
PTCD3-217ENST00000488801 SSSCA1O60232 199 aa14.07□□□□□ -0.16
PTCD3-217ENST00000488801 SCAF4O95104 1147 aaKnown RBP14.07□□□□□ -0.16
PTCD3-217ENST00000488801 TAS2R30P59541 319 aa14.07□□□□□ -0.16
PTCD3-217ENST00000488801 CD300EQ496F6 205 aaPredicted RBP14.07□□□□□ -0.16
PTCD3-217ENST00000488801 TOMM20LQ6UXN7 152 aa14.07□□□□□ -0.16
PTCD3-217ENST00000488801 TMEM14EPQ6UXP3 125 aa14.07□□□□□ -0.16
PTCD3-217ENST00000488801 UXS1Q8NBZ7 420 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms