RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 DICER1Q9UPY3 1922 aaKnown RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 A2ML1A8K2U0 1454 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 CHD1O14646 1710 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TRAV19A0A0A6YYK7 116 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 A0A0G2JMM0 328 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TRBV7-6A0A0J9YX20 115 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 A0A1W2PPB8 328 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TMEM72A0PK05 275 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 ODAMA1E959 279 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 KIR3DP1A8MWS1 328 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 FNDC10F2Z333 226 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 KRTAP4-16G5E9R7 235 aaPredicted RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 CDC42EP2O14613 210 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TAX1BP3O14907 124 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 UBE2L6O14933 153 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 OR2T1O43869 369 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 LTAP01374 205 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 HLA-DPB1P04440 258 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 CD14P08571 375 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 LINC00869P0C866 280 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 HIST1H1DP16402 221 aaKnown RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 CRHBPP24387 322 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 PSMB8P28062 276 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 SDC2P34741 201 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 FOXA3P55318 350 aaPredicted RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 TPPP2P59282 170 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 GNB2P62879 340 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 MYL5Q02045 173 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 PLGLB1Q02325 96 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 DIAPH2-AS1Q14236 149 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 PDGFRLQ15198 375 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 MSMO1Q15800 293 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TMEM241Q24JQ0 296 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 C1orf140Q5VVS0 124 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 SLC25A34Q6PIV7 304 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 CEMP1Q6PRD7 247 aaPredicted RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 LCA10Q71F78 164 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 SSX8Q7RTT4 187 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TRAPPC6BQ86SZ2 158 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TEX29Q8N6K0 151 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 OR5C1Q8NGR4 320 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 OR1J4Q8NGS1 313 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 FAM57AQ8TBR7 257 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 FAM104AQ969W3 186 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 C2orf50Q96LR7 162 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 TCEAL2Q9H3H9 227 aaPredicted RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 BANF2Q9H503 90 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 CKLFQ9UBR5 152 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 MARCOQ9UEW3 520 aaPredicted RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 FUT9Q9Y231 359 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 RNF11Q9Y3C5 154 aa2.09□□□□□ -2.07
RBM28-207ENST00000488249 MRPS16Q9Y3D3 137 aaKnown RBP2.09□□□□□ -2.07
RBM28-207ENST00000488249 DSPPQ9NZW4 1301 aa2.09□□□□□ -2.08
RBM28-207ENST00000488249 RRBP1Q9P2E9 1410 aaKnown RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 YEATS2Q9ULM3 1422 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 CCDC141Q6ZP82 1450 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 FER1L6Q2WGJ9 1857 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 BAZ1AQ9NRL2 1556 aaPredicted RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 PNMA8CA0A1B0GUJ8 204 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 PANO1I0J062 215 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 M0R378 163 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 PLA2G10O15496 165 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 GABARAPO95166 117 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 IGKV1-5P01602 117 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 CD2P06729 351 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 SEC11BP0C7V7 166 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 ZNF705DP0CH99 300 aaPredicted RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 ZNF823P16415 610 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 CRYGSP22914 178 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 RPL22P35268 128 aaKnown RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 ZNF80P51504 273 aaPredicted RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 ZNF83P51522 516 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 KRTAP10-8P60410 259 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 CATR1Q13166 79 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 HES1Q14469 280 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 RRN3P1Q2M238 152 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 SPANXN3Q5MJ09 141 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 CASC10Q5T4H9 136 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 FOXI2Q6ZQN5 318 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 LINC00305Q7Z4B0 112 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 GPHB5Q86YW7 130 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 MSRB3Q8IXL7 192 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 LINC00471Q8N535 108 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 LCN9Q8WX39 176 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 H1FXQ92522 213 aaKnown RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 RBPMSQ93062 196 aaKnown RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 ELSPBP1Q96BH3 223 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 PARP12Q9H0J9 701 aaKnown RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 RERGLQ9H628 205 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 RNF122Q9H9V4 155 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 SND1-IT1Q9HBX3 110 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 TAS2R8Q9NYW2 309 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 TAC3Q9UHF0 121 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 KTN1Q86UP2 1357 aaKnown RBP2.08□□□□□ -2.08
RBM28-207ENST00000488249 UBR2Q8IWV8 1755 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 CLIP1P30622 1438 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 SCAPERQ9BY12 1400 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 NSD3Q9BZ95 1437 aa2.08□□□□□ -2.08
RBM28-207ENST00000488249 ECM29Q5VYK3 1845 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms