RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SSSCA1O60232 199 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 OPRK1P41145 380 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 NKX2-1P43699 371 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 SUB1P53999 127 aaKnown RBP eCLIP13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 MFAP4P55083 255 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 OR9G4Q8NGQ1 327 aa13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 RCL1Q9Y2P8 373 aaKnown RBP13.05□□□□□ -0.32
SHROOM1-205ENST00000488072 ZNF320A2RRD8 509 aa13.04□□□□□ -0.32
SHROOM1-205ENST00000488072 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
SHROOM1-205ENST00000488072 KPRPQ5T749 579 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-205ENST00000488072 ALG5Q9Y673 324 aa13.04□□□□□ -0.32
SHROOM1-205ENST00000488072 IL15RAQ13261 267 aa13.03□□□□□ -0.32
SHROOM1-205ENST00000488072 TIGITQ495A1 244 aa13.03□□□□□ -0.32
SHROOM1-205ENST00000488072 SPANXN5Q5MJ07 72 aa13.03□□□□□ -0.32
SHROOM1-205ENST00000488072 C9orf66Q5T8R8 295 aa13.03□□□□□ -0.32
SHROOM1-205ENST00000488072 PRSS54Q6PEW0 395 aa13.03□□□□□ -0.32
SHROOM1-205ENST00000488072 LSM5Q9Y4Y9 91 aaKnown RBP13.03□□□□□ -0.32
SHROOM1-205ENST00000488072 MEGF8Q7Z7M0 2845 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 TMEM213A2RRL7 107 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 SNRPGP15A8MWD9 76 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 PTTG1O95997 202 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 IFNA4P05014 189 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 RND2P52198 227 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 DCTN2Q13561 401 aaKnown RBP13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 TATDN3Q17R31 274 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 GPHB5Q86YW7 130 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 BSCL2Q96G97 398 aaPredicted RBP13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 ACY3Q96HD9 319 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 C2orf50Q96LR7 162 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 PRR25Q96S07 402 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 MCRIP2Q9BUT9 160 aaKnown RBP13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 GPN1Q9HCN4 374 aaPredicted RBP13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 PSENENQ9NZ42 101 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 U3KQ87 197 aa13.02□□□□□ -0.33
SHROOM1-205ENST00000488072 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 PIGBOS1A0A0B4J2F0 54 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 K7EPK0 472 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 GNG7O60262 68 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 PRAF2O60831 178 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 MED6O75586 246 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 CD69Q07108 199 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 RAB32Q13637 225 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 FAM209BQ5JX69 171 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 GSG1LQ6UXU4 331 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 SLC16A13Q7RTY0 426 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 NPIPB3Q92617 1050 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 ZNF436Q9C0F3 470 aaPredicted RBP13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 C11orf1Q9H5F2 150 aa13.01□□□□□ -0.33
SHROOM1-205ENST00000488072 C7orf66A4D0T2 115 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 PMS2P5A8MQ11 134 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 PRSS46E5RG02 174 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 SSNA1O43805 119 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 CLN5O75503 358 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 IGKV1-17P01599 117 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 FCGR2BP31994 310 aaPredicted RBP13□□□□□ -0.33
SHROOM1-205ENST00000488072 EGFEM1PQ0D2K5 195 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 ARL16Q0P5N6 197 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 REC114Q7Z4M0 266 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 OR4X1Q8NH49 305 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 RNASEH2CQ8TDP1 164 aaKnown RBP13□□□□□ -0.33
SHROOM1-205ENST00000488072 C20orf24Q9BUV8 137 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 PALMDQ9NP74 551 aa13□□□□□ -0.33
SHROOM1-205ENST00000488072 IGHV3OR16-13A0A075B7E8 117 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 IGHV3-74A0A0B4J1X5 117 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 FOLR2P14207 255 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 H2BFSP57053 126 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 S100A10P60903 97 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 TOMM20LQ6UXN7 152 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 SMIM8Q96KF7 97 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 TXN2Q99757 166 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 MGAT4CQ9UBM8 478 aa12.99□□□□□ -0.33
SHROOM1-205ENST00000488072 IGKV1D-37A0A075B6S9 117 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 FAM24AA6NFZ4 105 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 H0YIZ8 118 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 LGALS9O00182 355 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 CORTO00230 105 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 NUPL2O15504 423 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 WIPF1O43516 503 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 YIF1AO95070 293 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 IGLV1-51P01701 117 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 METTL15P1P0C7V9 234 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 IGLC1P0CG04 106 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 CXCL3P19876 107 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 NPBWR1P48145 328 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 GAMTQ14353 236 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 OR8G2PQ6IF36 304 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 SPSB3Q6PJ21 355 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 ELOVL1Q9BW60 279 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 CACFD1Q9UGQ2 172 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 MLXQ9UH92 298 aa12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 STRAPQ9Y3F4 350 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-205ENST00000488072 K7EIL1 84 aa12.97□□□□□ -0.33
SHROOM1-205ENST00000488072 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms