RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 CCL28Q9NRJ3 127 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 CMC2Q9NRP2 79 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 CLN6Q9NWW5 311 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 COA4Q9NYJ1 87 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TVP23BQ9NYZ1 205 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 RPUSD1Q9UJJ7 312 aaKnown RBP2.39□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF391Q9UJN7 358 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 SORL1Q92673 2214 aa2.39□□□□□ -2.03
GPNMB-212ENST00000487890 TRAV8-7A0A075B6U6 113 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 CENPVL3A0A0U1RRI6 287 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM269A0A1B0GVZ9 245 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 A6NIN4 97 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TSTD3H0UI37 97 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 K7EMT4 169 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 CDIPTO14735 213 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 HPGDSO60760 199 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TYMSP04818 313 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 SMIM6P0DI80 62 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 PIPP12273 146 aaPredicted RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 GTF2F2P13984 249 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 MUC1P15941 1255 aaPredicted RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 HOXB6P17509 224 aaKnown RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 AKR1C4P17516 323 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 RCVRNP35243 200 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 HRH1P35367 487 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TALDO1P37837 337 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 RPL35P42766 123 aaKnown RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 RAB7AP51149 207 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 GNG3P63215 75 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 ARFRP1Q13795 201 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 KIR2DS1Q14954 304 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 PTGES3Q15185 160 aaKnown RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TAL2Q16559 108 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 ATP6V1FQ16864 119 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 SMIM21Q3B7S5 101 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 RBM48Q5RL73 367 aaKnown RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 CASC10Q5T4H9 136 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF684Q5T5D7 378 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 LINC01590Q5TEZ4 76 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 LPCAT4Q643R3 524 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TMEM42Q69YG0 159 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 HAGHLQ6PII5 290 aaPredicted RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 CD200R1LQ6Q8B3 271 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 WDR82Q6UXN9 313 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 SSX6Q7RTT6 188 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 WDR86Q86TI4 376 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 CBLN2Q8IUK8 224 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 ARRDC1Q8N5I2 433 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 CD177Q8N6Q3 437 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 OR2G3Q8NGZ4 309 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 OTOSQ8NHW6 89 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 OR51E1Q8TCB6 317 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 DNAH3Q8TD57 4116 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 CANT1Q8WVQ1 401 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 SFRP2Q96HF1 295 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 AMELYQ99218 206 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 P2RX4Q99571 388 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TBX5Q99593 518 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 APOL4Q9BPW4 351 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TMED9Q9BVK6 235 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 MROQ9BYG7 248 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 GPR84Q9NQS5 396 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF107Q9UII5 783 aaPredicted RBP2.38□□□□□ -2.03
GPNMB-212ENST00000487890 OR52A1Q9UKL2 312 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 RAB26Q9ULW5 256 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 SLC7A11Q9UPY5 501 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 VSIG4Q9Y279 399 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 MPC1Q9Y5U8 109 aa2.38□□□□□ -2.03
GPNMB-212ENST00000487890 TRAV39A0A0B4J263 110 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 A0A1B0GTI1 187 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 TINCRA0A1B0GVN0 87 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 PQLC2LA1A4F0 135 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 FAM168BA1KXE4 195 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 CLPSL1A2RUU4 121 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 ARRDC5A6NEK1 342 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 ZFP92A6NM28 416 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 NCBP2LA6PVI3 153 aaKnown RBP2.37□□□□□ -2.03
GPNMB-212ENST00000487890 ZNF670-ZNF695F2Z2N8 137 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 G3V2T6 193 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 H3BUX3 64 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 NPFFO15130 113 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 DLEU1O43261 78 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 BCL2L11O43521 198 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 ENTPD6O75354 484 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 FSTL3O95633 263 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 NRASP01111 189 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 ARG1P05089 322 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 HTR1AP08908 422 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 GIPP09681 153 aaPredicted RBP2.37□□□□□ -2.03
GPNMB-212ENST00000487890 CT45A6P0DMU7 189 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 CT45A5P0DMU8 189 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 CT45A7P0DMV0 189 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 HIST1H1EP10412 219 aaKnown RBP2.37□□□□□ -2.03
GPNMB-212ENST00000487890 SCGB1A1P11684 91 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 ALOX5APP20292 161 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 PSMA1P25786 263 aaKnown RBP2.37□□□□□ -2.03
GPNMB-212ENST00000487890 PAX6P26367 422 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 AKR1D1P51857 326 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 TCL1AP56279 114 aa2.37□□□□□ -2.03
GPNMB-212ENST00000487890 EDDM3BP56851 147 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms