RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SCN10AQ9Y5Y9 1956 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.47□□□□□ -2.33
CCDC66-221ENST00000487739 TRAV9-1A0A075B6T8 112 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 TRAV3A0A0B4J244 114 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 A0A0D9SG52 128 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 HYPMO75409 117 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 IFNA5P01569 189 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 MGST1P10620 155 aaKnown RBP0.47□□□□□ -2.33
CCDC66-221ENST00000487739 CD79AP11912 226 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 NKX2-5P52952 324 aaPredicted RBP0.47□□□□□ -2.33
CCDC66-221ENST00000487739 CDC42P60953 191 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 RAB4BP61018 213 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 RHEBQ15382 184 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 HIST3H3Q16695 136 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 SPANXN5Q5MJ07 72 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 LPCAT3Q6P1A2 487 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 TOMM6Q96B49 74 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 ULBP3Q9BZM4 244 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 SLC39A9Q9NUM3 307 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 SBF1O95248 1867 aa0.47□□□□□ -2.33
CCDC66-221ENST00000487739 E9PCH4 1651 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 TRBV6-8A0A0A6YYG3 113 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 EXOC1LA0A1B0GW35 172 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 AHSA1O95433 338 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 MIFP14174 115 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 PDE6HQ13956 83 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 SPOPLQ6IQ16 392 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 C20orf196Q8IYI0 205 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 HIST3H2BBQ8N257 126 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 ZNF418Q8TF45 676 aaPredicted RBP0.46□□□□□ -2.34
CCDC66-221ENST00000487739 PARD6GQ9BYG4 376 aaPredicted RBP0.46□□□□□ -2.34
CCDC66-221ENST00000487739 COMMD5Q9GZQ3 224 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 PEAK1Q9H792 1746 aa0.46□□□□□ -2.34
CCDC66-221ENST00000487739 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 CHP2O43745 196 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 UBL3O95164 117 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 CRYZL1O95825 349 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 IFNA10P01566 189 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 COX6A1P12074 109 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 SULT1A1P50225 295 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 PSME3P61289 254 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 CNBPP62633 177 aaKnown RBP0.45□□□□□ -2.34
CCDC66-221ENST00000487739 ACOT6Q3I5F7 207 aaPredicted RBP0.45□□□□□ -2.34
CCDC66-221ENST00000487739 Q8N814 137 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 TSPAN32Q96QS1 320 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 OR52E6Q96RD3 313 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 TAS2R4Q9NYW5 299 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 TMEM56-RWDD3S4R434 201 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 MYH10P35580 1976 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 NUP155O75694 1391 aa0.45□□□□□ -2.34
CCDC66-221ENST00000487739 TRAV26-2A0A0B4J265 109 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 FAM236DA0A1B0GTK5 79 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 OR4C46A6NHA9 309 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 SULT1B1O43704 296 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 LYZL6O75951 148 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 OR2J2O76002 312 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 TCL1BO95988 128 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 IFNA16P05015 189 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 FAM236CP0DP71 79 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 MAGOHP61326 146 aaKnown RBP0.44□□□□□ -2.34
CCDC66-221ENST00000487739 RHOGP84095 191 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 DEFB113Q30KQ7 82 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 CCDC122Q5T0U0 273 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 SFT2D1Q8WV19 159 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 LINC00526Q96FQ7 95 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 C8orf76Q96K31 380 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 OSTCQ9NRP0 149 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 MRPL27Q9P0M9 148 aaKnown RBP0.44□□□□□ -2.34
CCDC66-221ENST00000487739 ROBO3Q96MS0 1386 aa0.44□□□□□ -2.34
CCDC66-221ENST00000487739 BAALC-AS2P0C853 105 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 GDF5OSQ5U4N7 250 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 GPR146Q96CH1 333 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 DCUN1D1Q96GG9 259 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 OR51V1Q9H2C8 321 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 CDC42SE1Q9NRR8 79 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 ACER3Q9NUN7 267 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 PLXNA4Q9HCM2 1894 aa0.43□□□□□ -2.34
CCDC66-221ENST00000487739 OBSL1O75147 1896 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 TRAV12-1A0A0B4J245 112 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 CLDN24A6NM45 220 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 M0R036 132 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 M0R2N4 97 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 PIRO00625 290 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 LYPLA2O95372 231 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 CNIH1O95406 144 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 SMIM10L2AP0DMW4 78 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 SMIM10L2BP0DMW5 78 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 ZNF25P17030 456 aaPredicted RBP0.42□□□□□ -2.34
CCDC66-221ENST00000487739 S100A4P26447 101 aaKnown RBP0.42□□□□□ -2.34
CCDC66-221ENST00000487739 LINC01554Q52M75 96 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 C1orf137Q5JT78 98 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 CLDN22Q8N7P3 220 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 OR13D1Q8NGV5 346 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 MIXL1Q9H2W2 232 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 VPS29Q9UBQ0 182 aa0.42□□□□□ -2.34
CCDC66-221ENST00000487739 NEO1Q92859 1461 aa0.41□□□□□ -2.34
CCDC66-221ENST00000487739 MED1Q15648 1581 aaPredicted RBP0.41□□□□□ -2.34
CCDC66-221ENST00000487739 ALPK3Q96L96 1907 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms