RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ADCYAP1P18509 176 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 OR10J1P30954 320 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 ETFRF1Q6IPR1 90 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 LCN15Q6UWW0 184 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 C5orf56Q8N8D9 126 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 TMEM116Q8NCL8 245 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 RAB24Q969Q5 203 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 MISP3Q96FF7 219 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 ACY3Q96HD9 319 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 RBM14Q96PK6 669 aaKnown RBP7.46□□□□□ -1.22
SF3B1-211ENST00000487698 HSPB9Q9BQS6 159 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 FLNAP21333 2647 aaKnown RBP7.46□□□□□ -1.22
SF3B1-211ENST00000487698 TEX15Q9BXT5 2789 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 I3L2K1 104 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 CDC34P49427 236 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-211ENST00000487698 RND2P52198 227 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 BPIFB3P59826 476 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 PMS2P11Q13670 270 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 C10orf91Q5T1B1 145 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 FAM122CQ6P4D5 195 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 TTC9CQ8N5M4 171 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 OR1L6Q8NGR2 347 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 NPIPB3Q92617 1050 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 NARS2Q96I59 477 aaKnown RBP7.45□□□□□ -1.22
SF3B1-211ENST00000487698 SSX3Q99909 188 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 RASL11BQ9BPW5 248 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 SLC25A33Q9BSK2 321 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 PBDC1Q9BVG4 233 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 ACTR3CQ9C0K3 210 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-211ENST00000487698 WNT10AQ9GZT5 417 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 TREM1Q9NP99 234 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 MOB4Q9Y3A3 225 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 HECTD1Q9ULT8 2610 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 ZNF469Q96JG9 3925 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-211ENST00000487698 CYB5BO43169 146 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 EIF3GO75821 320 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3B1-211ENST00000487698 MT-CO2P00403 227 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 IGHV3-48P01763 117 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 AMY1AP04745 511 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 FGF8P55075 233 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-211ENST00000487698 WFDC11Q8NEX6 87 aa7.45□□□□□ -1.22
SF3B1-211ENST00000487698 IGLV11-55A0A075B6I3 123 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 TCRBV4S1A1TA0A5B7 111 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 A6NDX4 124 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 RBFOX3A6NFN3 312 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 H3BUX3 64 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 K7EIM0 57 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 TSPAN9O75954 239 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 PEA15Q15121 130 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 ZNF506Q5JVG8 444 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 CYP2G1PQ6ZSU1 146 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 TMEM219Q86XT9 240 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 SGMS2Q8NHU3 365 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 EIF5A2Q9GZV4 153 aaKnown RBP7.44□□□□□ -1.22
SF3B1-211ENST00000487698 SMDT1Q9H4I9 107 aa7.44□□□□□ -1.22
SF3B1-211ENST00000487698 CARHSP1Q9Y2V2 147 aaKnown RBP7.44□□□□□ -1.22
SF3B1-211ENST00000487698 TLN2Q9Y4G6 2542 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 LOC102723971A0A1B0GUV8 181 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 PSMB11A5LHX3 300 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 SFTA3P0C7M3 94 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 ICAM4Q14773 271 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 KLK9Q2XQG4 91 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 C9orf139Q6ZV77 190 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 RARRES2Q99969 163 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 SEC11CQ9BY50 192 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 KLK9Q9UKQ9 250 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 ATP6V0E1O15342 81 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 HMGB3O15347 200 aaKnown RBP7.43□□□□□ -1.22
SF3B1-211ENST00000487698 STAG3L2P0CL84 134 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 STAG3L3P0CL85 134 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 BCL2P10415 239 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
SF3B1-211ENST00000487698 SELENOTP62341 195 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 HAGHQ16775 308 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 CYB5R2Q6BCY4 276 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 CCDC28AQ8IWP9 274 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 OR4X1Q8NH49 305 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 C22orf15Q8WYQ4 148 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 TRGV9Q99603 122 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 FOXC2Q99958 501 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 SEPSECSQ9HD40 501 aaKnown RBP7.43□□□□□ -1.22
SF3B1-211ENST00000487698 GNG13Q9P2W3 67 aa7.43□□□□□ -1.22
SF3B1-211ENST00000487698 IGHV3-21A0A0B4J1V1 117 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 MDFIC2A0A1B0GVS7 189 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 A0A1W2PPV4 95 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 SH2D7A6NKC9 451 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-211ENST00000487698 ZFP92A6NM28 416 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 PPT1P50897 306 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 CRIP2P52943 208 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-211ENST00000487698 RHOBP62745 196 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 ZNF90Q03938 601 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 KHDC3LQ587J8 217 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 C19orf54Q5BKX5 351 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 BCL6BQ8N143 479 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-211ENST00000487698 CIARTQ8N365 385 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-211ENST00000487698 FAM110DQ8TAY7 271 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-211ENST00000487698 C19orf24Q9BVV8 132 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 TMPRSS5Q9H3S3 457 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms