RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 MUC21Q5SSG8 566 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 MRPL16Q9NX20 251 aaKnown RBP12.26□□□□□ -0.45
EPHB4-206ENST00000487222 EPDR1Q9UM22 224 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 TRAV1-1A0A0B4J248 108 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 IGKV3-20P01619 116 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 CFHR1Q03591 330 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 EFNB3Q15768 340 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 FREM3P0C091 2139 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 IGHV3OR16-10A0A075B7F0 116 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 IGHV3-66A0A0C4DH42 116 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 TCRBV4S1A1TA0A5B7 111 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 TEX38Q6PEX7 206 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 FGFBP3Q8TAT2 258 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 CYB5R2Q6BCY4 276 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 PVRIGQ6DKI7 326 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 CENPVQ7Z7K6 275 aaPredicted RBP12.25□□□□□ -0.45
EPHB4-206ENST00000487222 MTURNQ8N3F0 131 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 SEMA5BQ9P283 1151 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 NABP1Q96AH0 204 aa12.25□□□□□ -0.45
EPHB4-206ENST00000487222 A0A1B0GW64 132 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
EPHB4-206ENST00000487222 NPFFO15130 113 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 OR9G9P0C7N8 305 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 BEX4Q9NWD9 120 aaPredicted RBP12.24□□□□□ -0.45
EPHB4-206ENST00000487222 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 NBR2O15453 112 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 GNB1LQ9BYB4 327 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 FABP5P3A8MUU1 101 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 SUMO2P61956 95 aaKnown RBP12.24□□□□□ -0.45
EPHB4-206ENST00000487222 GNG5P63218 68 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 CSRP1P21291 193 aaKnown RBP12.24□□□□□ -0.45
EPHB4-206ENST00000487222 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
EPHB4-206ENST00000487222 MESP1Q9BRJ9 268 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 TMEM133Q9H2Q1 129 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 PGPEP1LA6NFU8 196 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.23□□□□□ -0.45
EPHB4-206ENST00000487222 GCSAMLQ5JQS6 135 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 C17orf82Q86X59 251 aaPredicted RBP12.23□□□□□ -0.45
EPHB4-206ENST00000487222 ASCL2Q99929 193 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 FAM181BA6NEQ2 426 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 SSBP4Q9BWG4 385 aaPredicted RBP12.23□□□□□ -0.45
EPHB4-206ENST00000487222 REG4Q9BYZ8 158 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 GPR179Q6PRD1 2367 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 TRPM7Q96QT4 1865 aa12.23□□□□□ -0.45
EPHB4-206ENST00000487222 PYYP10082 97 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 RNF125Q96EQ8 232 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 TRAV9-2A0A087WT02 112 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 CLEC19AQ6UXS0 136 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 SPCS1Q9Y6A9 102 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 OR10J3Q5JRS4 329 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 SLC50A1Q9BRV3 221 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 DNAL4O96015 105 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 SCN5AQ14524 2016 aa12.22□□□□□ -0.45
EPHB4-206ENST00000487222 IGHV3OR16-8A0A075B7F1 116 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 A0A1B0GWB2 263 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 STAG3L3P0CL85 134 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 TREML4Q6UXN2 200 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 CCL19Q99731 98 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 PINLYPA6NC86 204 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 HIST3H2BBQ8N257 126 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 IGKV1-27A0A075B6S5 117 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 EMP1P54849 157 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 NMSQ5H8A3 153 aa12.21□□□□□ -0.45
EPHB4-206ENST00000487222 MED12Q93074 2177 aa12.21□□□□□ -0.46
EPHB4-206ENST00000487222 CXCL1P09341 107 aa12.21□□□□□ -0.46
EPHB4-206ENST00000487222 LINC00614P0C842 121 aa12.21□□□□□ -0.46
EPHB4-206ENST00000487222 PAX1P15863 534 aa12.21□□□□□ -0.46
EPHB4-206ENST00000487222 GGNQ86UU5 652 aa12.21□□□□□ -0.46
EPHB4-206ENST00000487222 TFF1P04155 84 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 NUTF2P61970 127 aaKnown RBP12.2□□□□□ -0.46
EPHB4-206ENST00000487222 SAMD13Q5VXD3 122 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 ROS1P08922 2347 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 PSG8Q9UQ74 426 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 PSMB11A5LHX3 300 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 TSKUQ8WUA8 353 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 C5orf30Q96GV9 206 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 GGTLC1Q9BX51 225 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 TIMP3P35625 211 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 DMRTA2Q96SC8 542 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 JKAMPQ9P055 326 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 ZNF257Q9Y2Q1 563 aa12.2□□□□□ -0.46
EPHB4-206ENST00000487222 TMEM50AO95807 157 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 HBDP02042 147 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 PPBPP02775 128 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 LEPP41159 167 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 FOXF2Q12947 444 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 SRRM5B3KS81 715 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 SRSF4Q08170 494 aaKnown RBP12.19□□□□□ -0.46
EPHB4-206ENST00000487222 FOXL1Q12952 345 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 FOXG1P55316 489 aaPredicted RBP12.19□□□□□ -0.46
EPHB4-206ENST00000487222 ATP5L2Q7Z4Y8 100 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 ALKBH7Q9BT30 221 aaPredicted RBP12.19□□□□□ -0.46
EPHB4-206ENST00000487222 SPRR3Q9UBC9 169 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms