RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 RNF7Q9UBF6 113 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 RPUSD1Q9UJJ7 312 aaKnown RBP9.91□□□□□ -0.82
COL3A1-206ENST00000487010 PCNX2A6NKB5 2137 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 M0R1B8 84 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 PEX7O00628 323 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 HSBP1O75506 76 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 SP9P0CG40 484 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 PYYP10082 97 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 TSPOP30536 169 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 GLRXP35754 106 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 GATA4P43694 442 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 MAJINQ3KP22 176 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 TMEM30BQ3MIR4 351 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 PLA2G2CQ5R387 149 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 VHLLQ6RSH7 139 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 DEFB108BQ8NET1 73 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 FDCSPQ8NFU4 85 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 SNRNP40Q96DI7 357 aaKnown RBP9.9□□□□□ -0.82
COL3A1-206ENST00000487010 PAXXQ9BUH6 204 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 ZNRD1Q9P1U0 126 aa9.9□□□□□ -0.82
COL3A1-206ENST00000487010 MRPS16Q9Y3D3 137 aaKnown RBP9.9□□□□□ -0.82
COL3A1-206ENST00000487010 INTS1Q8N201 2190 aaKnown RBP9.89□□□□□ -0.83
COL3A1-206ENST00000487010 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 FAM181BA6NEQ2 426 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 TM4SF5O14894 197 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 COX7A2P2O60397 106 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 OR2J3O76001 311 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 SSBP2P81877 361 aaPredicted RBP9.89□□□□□ -0.83
COL3A1-206ENST00000487010 ERHP84090 104 aaKnown RBP9.89□□□□□ -0.83
COL3A1-206ENST00000487010 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 ORAOV1Q8WV07 137 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 RND1Q92730 232 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 CCL13Q99616 98 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 ALKBH7Q9BT30 221 aaPredicted RBP9.89□□□□□ -0.83
COL3A1-206ENST00000487010 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 IGLV3-9A0A075B6K5 115 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 M0R2Z0 102 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 C10orf113Q5VZT2 155 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 PATE2Q6UY27 113 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 ZNF833PQ6ZTB9 187 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 OR8B3Q8NGG8 313 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 OSR1Q8TAX0 266 aaPredicted RBP9.89□□□□□ -0.83
COL3A1-206ENST00000487010 OR8B2Q96RD0 313 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 CHRDL1Q9BU40 450 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 COLQQ9Y215 455 aaPredicted RBP9.89□□□□□ -0.83
COL3A1-206ENST00000487010 CACNA1GO43497 2377 aa9.89□□□□□ -0.83
COL3A1-206ENST00000487010 WDFY4Q6ZS81 3184 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 IGHV2-26A0A0B4J1V2 119 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 C20orf202A1L168 122 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 INS-IGF2F8WCM5 200 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 NKX2-8O15522 239 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 GPR6P46095 362 aaPredicted RBP9.88□□□□□ -0.83
COL3A1-206ENST00000487010 RPL8P62917 257 aaKnown RBP9.88□□□□□ -0.83
COL3A1-206ENST00000487010 ZNF788Q6ZQV5 615 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 FAM216BQ8N7L0 139 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 C7orf69Q9H7B7 122 aa9.88□□□□□ -0.83
COL3A1-206ENST00000487010 E7EUB6 86 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 HINT1P49773 126 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 TNFAIP6P98066 277 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 RNASEKQ6P5S7 137 aaKnown RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 SEM1Q6ZVN7 128 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 FXYD5Q96DB9 178 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 HARBI1Q96MB7 349 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 MRPL20Q9BYC9 149 aaKnown RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 ZNF430Q9H8G1 570 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 ZDBF2Q9HCK1 2354 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 TRAV17A0A0B4J275 112 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 TCRBV4S1A1TA0A5B7 111 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 C2orf70A6NJV1 201 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 HIGD1CA8MV81 97 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 H0YJW9 148 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 FSTL3O95633 263 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 APOA2P02652 100 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 HIST1H1EP10412 219 aaKnown RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 BPIFB3P59826 476 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 UBE2G1P62253 170 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 Q56UQ5 140 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 TIMM23BQ5SRD1 257 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 PRR27Q6MZM9 219 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 IGFL2Q6UWQ7 119 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 ZNF841Q6ZN19 808 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 ATP5L2Q7Z4Y8 100 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 NPIPB3Q92617 1050 aa9.87□□□□□ -0.83
COL3A1-206ENST00000487010 SSBP4Q9BWG4 385 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 FNDC4Q9H6D8 234 aaPredicted RBP9.87□□□□□ -0.83
COL3A1-206ENST00000487010 IGKV1D-37A0A075B6S9 117 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 A0A1B0GXF2 115 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 A0A1W2PN81 502 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 hADV38S2A0JD32 116 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 VWC2LB2RUY7 222 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 CORTO00230 105 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 CCL25O15444 150 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 IGHV1-46P01743 117 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 MYCNOSP40205 109 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 CAMPP49913 170 aa9.86□□□□□ -0.83
COL3A1-206ENST00000487010 SRSF6Q13247 344 aaKnown RBP9.86□□□□□ -0.83
COL3A1-206ENST00000487010 TMEM177Q53S58 311 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms