RNA–Protein interactions for RNA: ENST00000486686.1

LAMP3-205, Transcript of lysosomal associated membrane protein 3, human

TSL 5

Gene LAMP3, Length 469 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMP3-205	ENST00000486686	ARPC5L	Q9BPX5	153 aa		13.27	□□□□□ -0.29
LAMP3-205	ENST00000486686	GGACT	Q9BVM4	153 aa		13.27	□□□□□ -0.29
LAMP3-205	ENST00000486686	CYB5B	O43169	146 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	BCL2L11	O43521	198 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	CST7	O76096	145 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	AREG	P15514	252 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	CTRB1	P17538	263 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	NHLH2	Q02577	135 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	CTRB2	Q6GPI1	263 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	ETV3L	Q6ZN32	361 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	SLC35E3	Q7Z769	313 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	TMEM170A	Q8WVE7	144 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	P2RX4	Q99571	388 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	PARP11	Q9NR21	331 aa		13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	F11R	Q9Y624	299 aa	Known RBP	13.26	□□□□□ -0.29
LAMP3-205	ENST00000486686	FNDC10	F2Z333	226 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	CORT	O00230	105 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	ATP6V0E1	O15342	81 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	DFFB	O76075	338 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	IFNA4	P05014	189 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	OPCML	Q14982	345 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	KLK9	Q2XQG4	91 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	FBXL17	Q9UF56	701 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	KLK9	Q9UKQ9	250 aa		13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	PAIP2B	Q9ULR5	123 aa	Known RBP	13.25	□□□□□ -0.29
LAMP3-205	ENST00000486686	AP4M1	O00189	453 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	JTB	O76095	146 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	GPX4	P36969	197 aa	Predicted RBP	13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	EIF5A	P63241	154 aa	Known RBP	13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	SLC38A11	Q08AI6	406 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	ZNF266	Q14584	549 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	ASPHD1	Q5U4P2	390 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	SLC51B	Q86UW2	128 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	HAPLN4	Q86UW8	402 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	TMEM217	Q8N7C4	229 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	LFNG	Q8NES3	379 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	OR5C1	Q8NGR4	320 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	CACNG8	Q8WXS5	425 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	FAM103A1	Q9BTL3	118 aa	Known RBP	13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	FBXO7	Q9Y3I1	522 aa		13.24	□□□□□ -0.29
LAMP3-205	ENST00000486686	STAB2	Q8WWQ8	2551 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	PRSS46	E5RG02	174 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	BRI3	O95415	125 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	DLK1	P80370	383 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	ARL16	Q0P5N6	197 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	EXOSC2	Q13868	293 aa	Known RBP	13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	C19orf54	Q5BKX5	351 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	C9orf152	Q5JTZ5	239 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	OR8G2P	Q6IF36	304 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	ATP5S	Q99766	215 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	BOLA1	Q9Y3E2	137 aa		13.23	□□□□□ -0.29
LAMP3-205	ENST00000486686	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	TRAV41	A0A0B4J266	112 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	PSMB11	A5LHX3	300 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	SH2D7	A6NKC9	451 aa	Predicted RBP	13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	DEFA4	P12838	97 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	HIST1H1B	P16401	226 aa	Known RBP	13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	MYCNOS	P40205	109 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	VWC2	Q2TAL6	325 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	ETFRF1	Q6IPR1	90 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	UNQ5815/PRO19632	Q6UWF5	114 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	LILRB2	Q8N423	598 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	BSCL2	Q96G97	398 aa	Predicted RBP	13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	TMEM147	Q9BVK8	224 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	GON7	Q9BXV9	100 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	CYTL1	Q9NRR1	136 aa		13.22	□□□□□ -0.29
LAMP3-205	ENST00000486686	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.21	□□□□□ -0.29
LAMP3-205	ENST00000486686	LINC01548	A6NM66	108 aa		13.21	□□□□□ -0.29
LAMP3-205	ENST00000486686	REG1A	P05451	166 aa		13.21	□□□□□ -0.29
LAMP3-205	ENST00000486686	UBAC2	Q8NBM4	344 aa		13.21	□□□□□ -0.29
LAMP3-205	ENST00000486686	STOML3	Q8TAV4	291 aa		13.21	□□□□□ -0.29
LAMP3-205	ENST00000486686	UQCC1	Q9NVA1	299 aa		13.21	□□□□□ -0.29
LAMP3-205	ENST00000486686	THYN1	Q9P016	225 aa		13.21	□□□□□ -0.29
LAMP3-205	ENST00000486686		H3BUA1	57 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	IFNA5	P01569	189 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	APELA	P0DMC3	54 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	CLINT1	Q14677	625 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	ECSCR	Q19T08	205 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	SLC25A24	Q6NUK1	477 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	C10orf99	Q6UWK7	81 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	ZNF471	Q9BX82	626 aa	Predicted RBP	13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	SMIM3	Q9BZL3	60 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	WFDC1	Q9HC57	220 aa		13.2	□□□□□ -0.3
LAMP3-205	ENST00000486686	IGLV11-55	A0A075B6I3	123 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	NUDT19	A8MXV4	375 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	TPT1	P13693	172 aa	Known RBP	13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	MFAP2	P55001	183 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	COMMD1	Q8N668	190 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	OR5T1	Q8NG75	326 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	FANCD2OS	Q96PS1	177 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	ARV1	Q9H2C2	271 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686	DMRT1	Q9Y5R6	373 aa		13.19	□□□□□ -0.3
LAMP3-205	ENST00000486686		G3V318	75 aa		13.18	□□□□□ -0.3
LAMP3-205	ENST00000486686	PPIF	P30405	207 aa	Known RBP	13.18	□□□□□ -0.3
LAMP3-205	ENST00000486686	OPRK1	P41145	380 aa		13.18	□□□□□ -0.3
LAMP3-205	ENST00000486686	RPL7L1	Q6DKI1	246 aa	Known RBP	13.18	□□□□□ -0.3
LAMP3-205	ENST00000486686	SLA2	Q9H6Q3	261 aa		13.18	□□□□□ -0.3
LAMP3-205	ENST00000486686	NPVF	Q9HCQ7	196 aa		13.18	□□□□□ -0.3
LAMP3-205	ENST00000486686	LSM4	Q9Y4Z0	139 aa	Known RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms