RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SCARB1Q8WTV0 552 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 CITED2Q99967 270 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-229ENST00000486665 GNB4Q9HAV0 340 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 FXYD6-FXYD2A0A087WZ82 144 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 FAM223BA6NKX1 122 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 RPL12P30050 165 aaKnown RBP9.89□□□□□ -0.83
HDAC6-229ENST00000486665 GPX4P36969 197 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-229ENST00000486665 EWSR1Q01844 656 aaKnown RBP eCLIP9.89□□□□□ -0.83
HDAC6-229ENST00000486665 OR8G2PQ6IF36 304 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 ZNF546Q86UE3 836 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 FAM223AQ8IWN6 122 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 USMG5Q96IX5 58 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 OR5B12Q96R08 314 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 THYN1Q9P016 225 aa9.89□□□□□ -0.83
HDAC6-229ENST00000486665 CORTO00230 105 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 OPRK1P41145 380 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 SULT1A1P50225 295 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 CD69Q07108 199 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 EXOSC2Q13868 293 aaKnown RBP9.88□□□□□ -0.83
HDAC6-229ENST00000486665 TMEM217Q8N7C4 229 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 VN1R17PQ8TDU5 208 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 UBE2E2Q96LR5 201 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 SLC25A31Q9H0C2 315 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 TNFSF18Q9UNG2 199 aa9.88□□□□□ -0.83
HDAC6-229ENST00000486665 A0A0G2JLM5 398 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 ADARB2-AS1A8MUL3 147 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-229ENST00000486665 CDX1P47902 265 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-229ENST00000486665 GAMTQ14353 236 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 KHDC1LQ5JSQ8 128 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 ZNF343Q6P1L6 599 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 SLC16A13Q7RTY0 426 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 OR10P1Q8NGE3 313 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 ZNF502Q8TBZ5 544 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 EEF1AKMT3Q96AZ1 226 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 CXorf58Q96LI9 332 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 CITED1Q99966 193 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 C21orf62Q9NYP8 219 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 HSPB11Q9Y547 144 aa9.87□□□□□ -0.83
HDAC6-229ENST00000486665 TSSC4Q9Y5U2 329 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-229ENST00000486665 RPS10-NUDT3A0A1W2PQS6 291 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 A0A1W2PRX2 142 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 ANKRD34BA5PLL1 514 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 RNF222A6NCQ9 220 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 TRBV12-3P01733 135 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 C1QBP02746 253 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 CLEC3BP05452 202 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 MFAP4P55083 255 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 SLC38A11Q08AI6 406 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 ACSM6Q6P461 480 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 CLEC19AQ6UXS0 136 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 ACOT7LQ6ZUV0 252 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 STX12Q86Y82 276 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 CACNG8Q8WXS5 425 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 NPIPB3Q92617 1050 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 CCDC140Q96MF4 163 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 AQP10Q96PS8 301 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 WFDC1Q9HC57 220 aa9.86□□□□□ -0.83
HDAC6-229ENST00000486665 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.85□□□□□ -0.83
HDAC6-229ENST00000486665 TRBV7-1A0A0A6YYK4 115 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 HMSDA8MTL9 139 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 I3L521 148 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 ARPC5O15511 151 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 PFDN1O60925 122 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 LGALS1P09382 135 aaKnown RBP9.85□□□□□ -0.83
HDAC6-229ENST00000486665 S100A11P31949 105 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 NUP62P37198 522 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-229ENST00000486665 AP2S1P53680 142 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-229ENST00000486665 DLK1P80370 383 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 BAXQ07812 192 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 NSUN5P1Q3KNT7 163 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 ETFRF1Q6IPR1 90 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 UBAC2Q8NBM4 344 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 INO80EQ8NBZ0 244 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-229ENST00000486665 OR5C1Q8NGR4 320 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 OR4X1Q8NH49 305 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 ACY3Q96HD9 319 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 SMIM3Q9BZL3 60 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 ZC4H2Q9NQZ6 224 aa9.85□□□□□ -0.83
HDAC6-229ENST00000486665 OR2T8A6NH00 312 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 PPP5D1E7EU14 171 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 CXCL2P19875 107 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 FCGR2BP31994 310 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-229ENST00000486665 GPR183P32249 361 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 RND2P52198 227 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 CLINT1Q14677 625 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 DEFB136Q30KP8 78 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 Q56UQ5 140 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 C8orf86Q6ZUL3 223 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 C1QL4Q86Z23 238 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 KLHL30-AS1Q8NEE0 82 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 OR1S2Q8NGQ3 325 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 SLC35E1Q96K37 410 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 DUX3Q96PT4 197 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 TXN2Q99757 166 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 CHRDL1Q9BU40 450 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 GGACTQ9BVM4 153 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 MFFQ9GZY8 342 aa9.84□□□□□ -0.83
HDAC6-229ENST00000486665 PEF1Q9UBV8 284 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms