RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 HIPK2Q9H2X6 1198 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 RCL1Q9Y2P8 373 aaKnown RBP13.47□□□□□ -0.25
MCF2L-226ENST00000486210 S4R3C0 116 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
MCF2L-226ENST00000486210 K7EPK0 472 aa13.46□□□□□ -0.25
MCF2L-226ENST00000486210 PAX9P55771 341 aa13.46□□□□□ -0.25
MCF2L-226ENST00000486210 RRAS2P62070 204 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-226ENST00000486210 RAB32Q13637 225 aa13.46□□□□□ -0.25
MCF2L-226ENST00000486210 PVRIGQ6DKI7 326 aa13.46□□□□□ -0.25
MCF2L-226ENST00000486210 SLC24A4Q8NFF2 622 aa13.46□□□□□ -0.25
MCF2L-226ENST00000486210 EDA2RQ9HAV5 297 aa13.46□□□□□ -0.25
MCF2L-226ENST00000486210 LSM5Q9Y4Y9 91 aaKnown RBP13.46□□□□□ -0.25
MCF2L-226ENST00000486210 MFSD2BA6NFX1 497 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 FAM223BA6NKX1 122 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 IGHV3-23P01764 117 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 HIST1H1BP16401 226 aaKnown RBP13.45□□□□□ -0.26
MCF2L-226ENST00000486210 HTR2BP41595 481 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 SLURP1P55000 103 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 C15orf32Q32M92 178 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 FAM223AQ8IWN6 122 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 NECAP1Q8NC96 275 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 DLX4Q92988 240 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-226ENST00000486210 MISP3Q96FF7 219 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 OR4C12Q96R67 309 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 NMES1Q9C002 83 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 C11orf1Q9H5F2 150 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 ZMAT4Q9H898 229 aa13.45□□□□□ -0.26
MCF2L-226ENST00000486210 C15orf62A8K5M9 175 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 H3BP45 60 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 K7EIM0 57 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 IFNA10P01566 189 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 NPY1RP25929 384 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 S100A10P60903 97 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 ATP5G2Q06055 141 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 MLANAQ16655 118 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 OR1L6Q8NGR2 347 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 USMG5Q96IX5 58 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 TM2D3Q9BRN9 247 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 ELOVL1Q9BW60 279 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 U3KQ87 197 aa13.44□□□□□ -0.26
MCF2L-226ENST00000486210 IGHV4OR15-8A0A075B7B6 117 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 A0A087WW49 117 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 A0A0G2JLM5 398 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 I3L2K1 104 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 IGHV3-48P01763 117 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 HSPB1P04792 205 aaKnown RBP13.43□□□□□ -0.26
MCF2L-226ENST00000486210 GP9P14770 177 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 SUB1P53999 127 aaKnown RBP eCLIP13.43□□□□□ -0.26
MCF2L-226ENST00000486210 EXOSC2Q13868 293 aaKnown RBP13.43□□□□□ -0.26
MCF2L-226ENST00000486210 LRRC37A5PQ49AS3 106 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 CHAC2Q8WUX2 184 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 PINX1Q96BK5 328 aaKnown RBP13.43□□□□□ -0.26
MCF2L-226ENST00000486210 SMIM8Q96KF7 97 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 CIB3Q96Q77 187 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-226ENST00000486210 FNDC4Q9H6D8 234 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-226ENST00000486210 PSENENQ9NZ42 101 aa13.43□□□□□ -0.26
MCF2L-226ENST00000486210 H0YIZ8 118 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 MT-CO2P00403 227 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 TRBV12-3P01733 135 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 SPANXN5Q5MJ07 72 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 ZNF343Q6P1L6 599 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 ACSM6Q6P461 480 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 PPP1R1CQ8WVI7 109 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 ZNF436Q9C0F3 470 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-226ENST00000486210 THYN1Q9P016 225 aa13.42□□□□□ -0.26
MCF2L-226ENST00000486210 ANKRD34BA5PLL1 514 aa13.41□□□□□ -0.26
MCF2L-226ENST00000486210 CYB5BO43169 146 aa13.41□□□□□ -0.26
MCF2L-226ENST00000486210 CYCSP99999 105 aaKnown RBP13.41□□□□□ -0.26
MCF2L-226ENST00000486210 SCARB1Q8WTV0 552 aa13.41□□□□□ -0.26
MCF2L-226ENST00000486210 CCDC140Q96MF4 163 aa13.41□□□□□ -0.26
MCF2L-226ENST00000486210 OR5AC2Q9NZP5 309 aa13.41□□□□□ -0.26
MCF2L-226ENST00000486210 MRPL36Q9P0J6 103 aaKnown RBP13.41□□□□□ -0.26
MCF2L-226ENST00000486210 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
MCF2L-226ENST00000486210 A0A1B0GVG6 124 aa13.4□□□□□ -0.26
MCF2L-226ENST00000486210 F8W735 103 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-226ENST00000486210 CCNKO75909 580 aa13.4□□□□□ -0.26
MCF2L-226ENST00000486210 ZP3P21754 424 aa13.4□□□□□ -0.26
MCF2L-226ENST00000486210 ZNF502Q8TBZ5 544 aa13.4□□□□□ -0.26
MCF2L-226ENST00000486210 VN1R17PQ8TDU5 208 aa13.4□□□□□ -0.26
MCF2L-226ENST00000486210 EEF1AKMT3Q96AZ1 226 aa13.4□□□□□ -0.26
MCF2L-226ENST00000486210 RNF126Q9BV68 326 aa13.4□□□□□ -0.26
MCF2L-226ENST00000486210 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
MCF2L-226ENST00000486210 hCG_2014768A0A024R1R8 64 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.39□□□□□ -0.27
MCF2L-226ENST00000486210 TRAV14DV4A0A0A6YYC5 116 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 FAM24AA6NFZ4 105 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 PMS2P5A8MQ11 134 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 L7N2F9 121 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 DEDDO75618 318 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 MPC2O95563 127 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 IFNA4P05014 189 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 OPRK1P41145 380 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 TAS2R30P59541 319 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 VAMP2P63027 116 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 Q5BKY6 102 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 TMEM14EPQ6UXP3 125 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 CLEC19AQ6UXS0 136 aa13.39□□□□□ -0.27
MCF2L-226ENST00000486210 RNASEH2CQ8TDP1 164 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms