RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 IGHV7-4-1A0A0J9YVY3 117 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 TMEM50AO95807 157 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 AP3S2P59780 193 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 KLF9Q13886 244 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-204ENST00000486023 TOMM20LQ6UXN7 152 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 LYZL2Q7Z4W2 148 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-204ENST00000486023 TMEM56-RWDD3S4R434 201 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 V9GYH0 126 aa13.19□□□□□ -0.3
COL6A1-204ENST00000486023 LOC102724200A0A096LPH7 203 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-204ENST00000486023 INS-IGF2F8WCM5 200 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 CORTO00230 105 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 CHEK1O14757 476 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 TSPAN4O14817 238 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 SULT1A3P0DMM9 295 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 SULT1A4P0DMN0 295 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 ANXA3P12429 323 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 FCGR2BP31994 310 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-204ENST00000486023 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
COL6A1-204ENST00000486023 MRPL36Q9P0J6 103 aaKnown RBP13.18□□□□□ -0.3
COL6A1-204ENST00000486023 PUS1Q9Y606 427 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL6A1-204ENST00000486023 HTR2BP41595 481 aa13.17□□□□□ -0.3
COL6A1-204ENST00000486023 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
COL6A1-204ENST00000486023 ZNF79Q15937 498 aa13.17□□□□□ -0.3
COL6A1-204ENST00000486023 CASC10Q5T4H9 136 aa13.17□□□□□ -0.3
COL6A1-204ENST00000486023 OR52E5Q8NH55 327 aa13.17□□□□□ -0.3
COL6A1-204ENST00000486023 GINS3Q9BRX5 216 aa13.17□□□□□ -0.3
COL6A1-204ENST00000486023 GGTLC1Q9BX51 225 aa13.17□□□□□ -0.3
COL6A1-204ENST00000486023 RBM38Q9H0Z9 239 aaKnown RBP13.17□□□□□ -0.3
COL6A1-204ENST00000486023 FNDC4Q9H6D8 234 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-204ENST00000486023 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 OR4C46A6NHA9 309 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 APOHP02749 345 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-204ENST00000486023 VAMP1P23763 118 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 INPP1P49441 399 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
COL6A1-204ENST00000486023 SPANXN2Q5MJ10 180 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 LGI3Q8N145 548 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 TRIM63Q969Q1 353 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 GALNT14Q96FL9 552 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 OR10C1Q96KK4 312 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 EDA2RQ9HAV5 297 aa13.16□□□□□ -0.3
COL6A1-204ENST00000486023 A0A1B0GU03 582 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 CLN5O75503 358 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 IFNA10P01566 189 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 RPL35AP18077 110 aaKnown RBP13.15□□□□□ -0.3
COL6A1-204ENST00000486023 TIGITQ495A1 244 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 TCF24Q7RTU0 167 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 CCDC190Q86UF4 302 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 APRG1Q8IVJ8 170 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 SLC24A4Q8NFF2 622 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 OR1S1Q8NH92 325 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 IL22RA2Q969J5 263 aa13.15□□□□□ -0.3
COL6A1-204ENST00000486023 A0A0B4J2A0 478 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 CCR6P51684 374 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 SMCO1Q147U7 214 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 PVRIGQ6DKI7 326 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 OR4X1Q8NH49 305 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 SHPKQ9UHJ6 478 aa13.14□□□□□ -0.31
COL6A1-204ENST00000486023 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 DNASE2O00115 360 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-204ENST00000486023 DFFBO76075 338 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 RND2P52198 227 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 ZNF124Q15973 351 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 AARDQ4LEZ3 155 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 LILRB2Q8N423 598 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 RBKSQ9H477 322 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 ZFAND3Q9H8U3 227 aa13.13□□□□□ -0.31
COL6A1-204ENST00000486023 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
COL6A1-204ENST00000486023 NPPCP23582 126 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 NPY1RP25929 384 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 BMI1P35226 326 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 SRPXP78539 464 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 TNFRSF9Q07011 255 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 TMEM128Q5BJH2 165 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 NMSQ5H8A3 153 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 TRIQKQ629K1 86 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 DTD1Q8TEA8 209 aa13.12□□□□□ -0.31
COL6A1-204ENST00000486023 PAIP2BQ9ULR5 123 aaKnown RBP13.12□□□□□ -0.31
COL6A1-204ENST00000486023 IFNA4P05014 189 aa13.11□□□□□ -0.31
COL6A1-204ENST00000486023 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
COL6A1-204ENST00000486023 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
COL6A1-204ENST00000486023 TMEM170AQ8WVE7 144 aa13.11□□□□□ -0.31
COL6A1-204ENST00000486023 METTL26Q96S19 204 aa13.11□□□□□ -0.31
COL6A1-204ENST00000486023 SLC25A21Q9BQT8 299 aaPredicted RBP13.11□□□□□ -0.31
COL6A1-204ENST00000486023 SRRQ9GZT4 340 aa13.11□□□□□ -0.31
COL6A1-204ENST00000486023 RABAC1Q9UI14 185 aa13.11□□□□□ -0.31
COL6A1-204ENST00000486023 RYR3Q15413 4870 aa13.1□□□□□ -0.31
COL6A1-204ENST00000486023 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms