RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 HAPLN4Q86UW8 402 aa8.93□□□□□ -0.98
SND1-212ENST00000485871 MBD3L1Q8WWY6 194 aa8.93□□□□□ -0.98
SND1-212ENST00000485871 OR4C12Q96R67 309 aa8.93□□□□□ -0.98
SND1-212ENST00000485871 RASL11BQ9BPW5 248 aa8.93□□□□□ -0.98
SND1-212ENST00000485871 SRSF8Q9BRL6 282 aaKnown RBP8.93□□□□□ -0.98
SND1-212ENST00000485871 SLC35B3Q9H1N7 401 aa8.93□□□□□ -0.98
SND1-212ENST00000485871 PLEKHA3Q9HB20 300 aa8.93□□□□□ -0.98
SND1-212ENST00000485871 ESM1Q9NQ30 184 aa8.93□□□□□ -0.98
SND1-212ENST00000485871 SONP18583 2426 aaKnown RBP8.93□□□□□ -0.98
SND1-212ENST00000485871 SVEP1Q4LDE5 3571 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 UBE2L5PA0A1B0GUS4 154 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 A0A1W2PN81 502 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 RBFOX3A6NFN3 312 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 LINC01548A6NM66 108 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 M0QZK8 103 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 AGPAT2O15120 278 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 RNASE2P10153 161 aaKnown RBP8.92□□□□□ -0.98
SND1-212ENST00000485871 ADCYAP1P18509 176 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 CHRNA7P36544 502 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 HOXA1P49639 335 aaPredicted RBP8.92□□□□□ -0.98
SND1-212ENST00000485871 GNB1P62873 340 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 DLK1P80370 383 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 SRSF3P84103 164 aaKnown RBP8.92□□□□□ -0.98
SND1-212ENST00000485871 RUNX1Q01196 453 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 AKR1C1Q04828 323 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 ARL16Q0P5N6 197 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 KHDC3LQ587J8 217 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 C19orf54Q5BKX5 351 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 PVRIGQ6DKI7 326 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 Q6ZS46 218 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 OR10G4Q8NGN3 311 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 ARPC1AQ92747 370 aa8.92□□□□□ -0.98
SND1-212ENST00000485871 HEYLQ9NQ87 328 aaPredicted RBP8.92□□□□□ -0.98
SND1-212ENST00000485871 DNAJC9-AS1A6NH13 148 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 PRSS46E5RG02 174 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 ATP6V0E1O15342 81 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 ACTL6BO94805 426 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 IFNA10P01566 189 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 IGHG2P01859 326 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 HSPB1P04792 205 aaKnown RBP8.91□□□□□ -0.98
SND1-212ENST00000485871 AREGP15514 252 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 SRD5A1P18405 259 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 FHITP49789 147 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 BLCAPP62952 87 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 ZNF506Q5JVG8 444 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 SPSB3Q6PJ21 355 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 ZNF114Q8NC26 417 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 SLC24A4Q8NFF2 622 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 SFT2D1Q8WV19 159 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 FAM103A1Q9BTL3 118 aaKnown RBP8.91□□□□□ -0.98
SND1-212ENST00000485871 SCRT1Q9BWW7 348 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 HINT2Q9BX68 163 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 TMEM231Q9H6L2 316 aa8.91□□□□□ -0.98
SND1-212ENST00000485871 CLDN34H7C241 214 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 CRYGCP07315 174 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 CTRB1P17538 263 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 MDKP21741 143 aaPredicted RBP8.9□□□□□ -0.98
SND1-212ENST00000485871 FGF7P21781 194 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 PPT1P50897 306 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 KLK9Q2XQG4 91 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 ACOT6Q3I5F7 207 aaPredicted RBP8.9□□□□□ -0.98
SND1-212ENST00000485871 C2orf83Q53S99 150 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 CTRB2Q6GPI1 263 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 RBMS3Q6XE24 437 aaKnown RBP8.9□□□□□ -0.98
SND1-212ENST00000485871 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
SND1-212ENST00000485871 SGMS2Q8NHU3 365 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 P2RX4Q99571 388 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 RSG1Q9BU20 258 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 TNFRSF19Q9NS68 423 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 ZNF580Q9UK33 172 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 KLK9Q9UKQ9 250 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 TMA7Q9Y2S6 64 aaKnown RBP8.9□□□□□ -0.98
SND1-212ENST00000485871 DMRT1Q9Y5R6 373 aa8.9□□□□□ -0.98
SND1-212ENST00000485871 CTXND1A0A1B0GTU2 59 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 DNASE2O00115 360 aaPredicted RBP8.89□□□□□ -0.99
SND1-212ENST00000485871 CYB5BO43169 146 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 WIPF1O43516 503 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 TSPAN9O75954 239 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 CNIH1O95406 144 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 IGF1P05019 195 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 REG1AP05451 166 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 APELAP0DMC3 54 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 OR13C7P0DN81 318 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 NPY1RP25929 384 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 MFAP2P55001 183 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 HILS1P60008 231 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 ERHP84090 104 aaKnown RBP8.89□□□□□ -0.99
SND1-212ENST00000485871 SCGB2A2Q13296 93 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 RAB31Q13636 194 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 RHEBQ15382 184 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 GUCA2BQ16661 112 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 SOHLH1Q5JUK2 328 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 ETV3LQ6ZN32 361 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 C19orf35Q6ZS72 473 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 Q8N2B8 174 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 DUX5Q96PT3 197 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 NPCDR1Q9BY65 106 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 ACTR3CQ9C0K3 210 aaPredicted RBP8.89□□□□□ -0.99
SND1-212ENST00000485871 ZNF702PQ9H963 129 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms