RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SNCBQ16143 134 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 C6orf226Q5I0X4 101 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 SPANXN2Q5MJ10 180 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 FAM131AQ6UXB0 335 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 UNQ9165/PRO28630Q6UXU0 137 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 SLC25A48Q6ZT89 311 aaKnown RBP2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 SLC16A13Q7RTY0 426 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 LINC00311Q8N616 119 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 OR51T1Q8NGJ9 327 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 OR10AC1Q8NH08 325 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 OTOSQ8NHW6 89 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 GRPEL2Q8TAA5 225 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 RASSF5Q8WWW0 418 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 MCUR1Q96AQ8 359 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 PELI1Q96FA3 418 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 PAIP2Q9BPZ3 127 aaKnown RBP2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 AUNIPQ9H7T9 357 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 EXOSC4Q9NPD3 245 aaKnown RBP2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 CCL28Q9NRJ3 127 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 ARMC1Q9NVT9 282 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 GNG12Q9UBI6 72 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 CD300AQ9UGN4 299 aa2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 ZNF230Q9UIE0 474 aaPredicted RBP2.38□□□□□ -2.03
SMARCC1-207ENST00000485833 A0A0G2JLM5 398 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 TMEM269A0A1B0GVZ9 245 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 LOC110117498-PIK3R3F6TDL0 507 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 H0YJX3 145 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 CXCR6O00574 342 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 AGPAT2O15120 278 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 ALOX5APP20292 161 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 CBLN1P23435 193 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 CDKN1BP46527 198 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 ATP1B3P54709 279 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 ADARB1P78563 741 aaKnown RBP2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 GK3PQ14409 553 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 TRIM16LQ309B1 348 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 PIGYQ3MUY2 71 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 AKIRIN2Q53H80 203 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 SOHLH1Q5JUK2 328 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 AADACL4Q5VUY2 407 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 Q6ZSR3 168 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 UBE2DNLQ8IWF7 75 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 SLC38A6Q8IZM9 456 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 DHRSXQ8N5I4 330 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 OR4C5Q8NGB2 326 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 OR1L1Q8NH94 360 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 CD300LFQ8TDQ1 290 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 ADAT3Q96EY9 351 aaPredicted RBP2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 APOL4Q9BPW4 351 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 ZNF251Q9BRH9 671 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 OR51V1Q9H2C8 321 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 IFI27L2Q9H2X8 130 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 CMTM6Q9NX76 183 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 V9GYQ6 96 aa2.37□□□□□ -2.03
SMARCC1-207ENST00000485833 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 DEGS1O15121 323 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 APOC1P02654 83 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 S100A9P06702 114 aaKnown RBP2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 SAA2P0DJI9 122 aaPredicted RBP2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 MAGEA2P43356 314 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 P2RY1P47900 373 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 KRTAP10-4P60372 401 aaPredicted RBP2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 CDC42P60953 191 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 RHOGP84095 191 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 ZSCAN26Q16670 478 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 WHAMMP3Q1A5X7 153 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 RPL39P5Q59GN2 51 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 SPIN3Q5JUX0 258 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 LELP1Q5T871 98 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 FAHD1Q6P587 224 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 SSX6Q7RTT6 188 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 IFT20Q8IY31 132 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 STXBP6Q8NFX7 210 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 OR10A7Q8NGE5 316 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 OR1L6Q8NGR2 347 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 OR10K1Q8NGX5 313 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 OR4A5Q8NH83 315 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 ARL11Q969Q4 196 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 TSSK6Q9BXA6 273 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 CHST5Q9GZS9 411 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 CST11Q9H112 138 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 ANKRD19PQ9H560 264 aa2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 METTL1Q9UBP6 276 aaKnown RBP2.36□□□□□ -2.03
SMARCC1-207ENST00000485833 TNXBP22105 4242 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 IGHV3OR16-8A0A075B7F1 116 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 TMEM120BA0PK00 339 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 CCDC182A6NF36 153 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 M0R129 80 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 CYB5AP00167 134 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 IGLV2-23P01705 113 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 IGKV1-16P04430 117 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 HSMCR30P0CW71 290 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 CT45A6P0DMU7 189 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 CT45A5P0DMU8 189 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 CT45A7P0DMV0 189 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 CCL1P22362 96 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 SLC2A5P22732 501 aa2.35□□□□□ -2.03
SMARCC1-207ENST00000485833 PPP1CCP36873 323 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms