RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 HEYLQ9NQ87 328 aaPredicted RBP11.22□□□□□ -0.61
YIF1A-208ENST00000485820 SMPXQ9UHP9 88 aa11.22□□□□□ -0.61
YIF1A-208ENST00000485820 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
YIF1A-208ENST00000485820 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
YIF1A-208ENST00000485820 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
YIF1A-208ENST00000485820 ANXA3P12429 323 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 CCR6P51684 374 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 SMCO1Q147U7 214 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 C2orf83Q53S99 150 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 RBPMS2Q6ZRY4 209 aaKnown RBP11.21□□□□□ -0.61
YIF1A-208ENST00000485820 LRTM2Q8N967 370 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 TMEM170AQ8WVE7 144 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 ZMAT4Q9H898 229 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 CACFD1Q9UGQ2 172 aa11.21□□□□□ -0.61
YIF1A-208ENST00000485820 TENM3Q9P273 2699 aa11.21□□□□□ -0.62
YIF1A-208ENST00000485820 STAB2Q8WWQ8 2551 aa11.21□□□□□ -0.62
YIF1A-208ENST00000485820 CEBPZOSA8MTT3 80 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 CHEK1O14757 476 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 TSPAN4O14817 238 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 YIF1AO95070 293 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 NXPH3O95157 252 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 SRPXP78539 464 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 ANKRD55Q3KP44 614 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 TOMM20LQ6UXN7 152 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 SLC16A13Q7RTY0 426 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 OR52B4Q8NGK2 314 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 OR4X1Q8NH49 305 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 HSPB7Q9UBY9 170 aa11.2□□□□□ -0.62
YIF1A-208ENST00000485820 TRAV14DV4A0A0A6YYC5 116 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 IGHV7-4-1A0A0J9YVY3 117 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 A0A1B0GU03 582 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 PITX3O75364 302 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 CLN5O75503 358 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 SFT2D2O95562 160 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 OPRK1P41145 380 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 TNFRSF9Q07011 255 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 TMEM116Q8NCL8 245 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 SPAG8Q99932 426 aaPredicted RBP11.19□□□□□ -0.62
YIF1A-208ENST00000485820 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
YIF1A-208ENST00000485820 IGHV3-49A0A0A0MS15 119 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 DUXBA0A1W2PPF3 345 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 NAP1L6A6NFF2 107 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 VAMP1P23763 118 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 PPP1R1AQ13522 171 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
YIF1A-208ENST00000485820 TRIQKQ629K1 86 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 FAM90A2PQ658T7 463 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 LAMTOR1Q6IAA8 161 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 ZNF600Q6ZNG1 722 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 CENPSQ8N2Z9 138 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 SLC24A4Q8NFF2 622 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
YIF1A-208ENST00000485820 RNF2Q99496 336 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 HIPK2Q9H2X6 1198 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 RBKSQ9H477 322 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 SRD5A3Q9H8P0 318 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
YIF1A-208ENST00000485820 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
YIF1A-208ENST00000485820 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 LINC00854A0A1B0GVQ3 168 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 NDUFB6O95139 128 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 IGKV1-17P01599 117 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 SLC25A6P12236 298 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 INPP1P49441 399 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 PRSS54Q6PEW0 395 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 LILRB2Q8N423 598 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 SPATA25Q9BR10 227 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 U3KQ87 197 aa11.17□□□□□ -0.62
YIF1A-208ENST00000485820 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 TRAV30A0A087WSZ9 112 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 RPS10-NUDT3A0A1W2PQS6 291 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
YIF1A-208ENST00000485820 IL7P13232 177 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 NPY1RP25929 384 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 BTCP35070 178 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
YIF1A-208ENST00000485820 NOXA1Q86UR1 476 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 OR1S1Q8NH92 325 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 DTD1Q8TEA8 209 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 FLVCR2Q9UPI3 526 aa11.16□□□□□ -0.62
YIF1A-208ENST00000485820 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 PLA2G10O15496 165 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 IFNA10P01566 189 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 IGLC1P0CG04 106 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 SLC25A4P12235 298 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 TIGITQ495A1 244 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 GINS3Q9BRX5 216 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 VSIRQ9H7M9 311 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 TMED3Q9Y3Q3 217 aa11.15□□□□□ -0.62
YIF1A-208ENST00000485820 HOXB5P09067 269 aa11.14□□□□□ -0.63
YIF1A-208ENST00000485820 RND2P52198 227 aa11.14□□□□□ -0.63
YIF1A-208ENST00000485820 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
YIF1A-208ENST00000485820 ODF3L2Q3SX64 289 aa11.14□□□□□ -0.63
YIF1A-208ENST00000485820 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
YIF1A-208ENST00000485820 ST8SIA2Q92186 375 aa11.14□□□□□ -0.63
YIF1A-208ENST00000485820 NPIPB3Q92617 1050 aa11.14□□□□□ -0.63
YIF1A-208ENST00000485820 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms