RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 COLCA2A8K830 154 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 C16orf97H3BN30 126 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 IGHV3-9P01782 118 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 IGLC1P0CG04 106 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 GZMBP10144 247 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 FABP2P12104 132 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 NFYBP25208 207 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 CRYBB3P26998 211 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 PSMB8P28062 276 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 OPRK1P41145 380 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 FOXA1P55317 472 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 LMO4P61968 165 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 RPS11P62280 158 aaKnown RBP eCLIP3.48□□□□□ -1.85
RTN4-213ENST00000485749 RPS21P63220 83 aaKnown RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 ERCC8Q13216 396 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 HMGN3Q15651 99 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 ZNF141Q15928 474 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 NCBP2-AS2Q69YL0 99 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 ALKAL2Q6UX46 152 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 TEX43Q6ZNM6 134 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 PTAR1Q7Z6K3 402 aaPredicted RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 LHFPL1Q86WI0 220 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 HIST3H2BBQ8N257 126 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 SLC22A24Q8N4F4 322 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 OR5AK2Q8NH90 309 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 ZNF431Q8TF32 576 aaPredicted RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 MRPS24Q96EL2 167 aaKnown RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 CNRIP1Q96F85 164 aaPredicted RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 ATXN7L3BQ96GX2 97 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 C2orf50Q96LR7 162 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 CARD19Q96LW7 228 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 GPX7Q96SL4 187 aaPredicted RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 C11orf68Q9H3H3 251 aaKnown RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 UQCR10Q9UDW1 63 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 MYH14Q7Z406 1995 aaKnown RBP3.48□□□□□ -1.85
RTN4-213ENST00000485749 STRCQ7RTU9 1775 aa3.48□□□□□ -1.85
RTN4-213ENST00000485749 SBF2Q86WG5 1849 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 SLX4Q8IY92 1834 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 IGHV3OR16-13A0A075B7E8 117 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 TRAV27A0A087WT01 109 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 TRGV10A0A0A0MS01 117 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 IGHV1-69DA0A0B4J2H0 117 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 TRBV5-4A0A0C4DH59 114 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 A0A0D9SG52 128 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 FAM236AA0A1B0GUQ0 79 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 FAM236BA0A1B0GV22 79 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 OR2T8A6NH00 312 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 A8MWV9 139 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 TMEM262E9PQX1 116 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 M0R233 179 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 COX7A2P2O60397 106 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 CST7O76096 145 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 GABARAPO95166 117 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 TRBV12-3P01733 135 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 CTSEP14091 401 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 FABP4P15090 132 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 SNCAP37840 140 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 CDKN2AP42771 156 aaKnown RBP3.47□□□□□ -1.85
RTN4-213ENST00000485749 PSMB3P49720 205 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 CSRP3P50461 194 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 PRR3P79522 188 aaKnown RBP3.47□□□□□ -1.85
RTN4-213ENST00000485749 C6orf99Q4VX62 202 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 KHDC3LQ587J8 217 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 C9orf153Q5TBE3 101 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 AADACL3Q5VUY0 350 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 C1orf140Q5VVS0 124 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 AMTNQ6UX39 209 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 LINC00305Q7Z4B0 112 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 WDR86Q86TI4 376 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 ZNF429Q86V71 674 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 MSRB3Q8IXL7 192 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 C1orf174Q8IYL3 243 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 TMEM75Q8N9X5 138 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 C11orf72Q8NBR9 251 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 ZNRF1Q8ND25 227 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 MRPL30Q8TCC3 161 aaKnown RBP3.47□□□□□ -1.85
RTN4-213ENST00000485749 LMX1AQ8TE12 382 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 MS4A6EQ96DS6 147 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 YPEL4Q96NS1 127 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 SDF2Q99470 211 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 SPIN2AQ99865 258 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 SPIN2BQ9BPZ2 258 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 GABARAPL3Q9BY60 117 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 NAA60Q9H7X0 242 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 OTORQ9NRC9 128 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 AK3Q9UIJ7 227 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 TPRKBQ9Y3C4 175 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 MRPS16Q9Y3D3 137 aaKnown RBP3.47□□□□□ -1.85
RTN4-213ENST00000485749 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 STRCP1A6NGW2 1772 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 LRRC37AA6NMS7 1700 aa3.47□□□□□ -1.85
RTN4-213ENST00000485749 CKAP5Q14008 2032 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 PCM1Q15154 2024 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 CACNA1IQ9P0X4 2223 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 COL16A1Q07092 1604 aaPredicted RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 AHDC1Q5TGY3 1603 aaPredicted RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 TRBV20OR9-2A0A075B6H5 130 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms