RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 BAXQ07812 192 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 GAMTQ14353 236 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 KRTAP21-3Q3LHN1 58 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 ZNF546Q86UE3 836 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 OR4X1Q8NH49 305 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 DCUN1D4Q92564 292 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 MISP3Q96FF7 219 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 TXN2Q99757 166 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 ZNF747Q9BV97 191 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 GGACTQ9BVM4 153 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 GNB4Q9HAV0 340 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.23□□□□□ -0.45
APOE-205ENST00000485628 TRBV7-1A0A0A6YYK4 115 aa12.23□□□□□ -0.45
APOE-205ENST00000485628 CST7O76096 145 aa12.23□□□□□ -0.45
APOE-205ENST00000485628 DLK1P80370 383 aa12.23□□□□□ -0.45
APOE-205ENST00000485628 C18orf65Q6ZTR6 163 aa12.23□□□□□ -0.45
APOE-205ENST00000485628 OR10P1Q8NGE3 313 aa12.23□□□□□ -0.45
APOE-205ENST00000485628 HSPB11Q9Y547 144 aa12.23□□□□□ -0.45
APOE-205ENST00000485628 STAB1Q9NY15 2570 aa12.23□□□□□ -0.45
APOE-205ENST00000485628 RPS10-NUDT3A0A1W2PQS6 291 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 S100A11P31949 105 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 OPRK1P41145 380 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 ETFRF1Q6IPR1 90 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 SLC16A13Q7RTY0 426 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 C4orf3Q8WVX3 66 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 MDFIQ99750 246 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 C21orf62Q9NYP8 219 aa12.22□□□□□ -0.45
APOE-205ENST00000485628 LSM4Q9Y4Z0 139 aaKnown RBP12.22□□□□□ -0.45
APOE-205ENST00000485628 TSSC4Q9Y5U2 329 aaPredicted RBP12.22□□□□□ -0.45
APOE-205ENST00000485628 IGKV1OR2-108A0A075B7D4 117 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 FXYD6-FXYD2A0A087WZ82 144 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 TCRBV4S1A1TA0A5B7 111 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 LGALS1P09382 135 aaKnown RBP12.21□□□□□ -0.45
APOE-205ENST00000485628 MFAP4P55083 255 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 ZNF345Q14585 488 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 FAM209BQ5JX69 171 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 HIST2H2BDQ6DRA6 164 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 OR8G2PQ6IF36 304 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 ACOT7LQ6ZUV0 252 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 NDUFA11Q86Y39 141 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 THAP8Q8NA92 274 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 EEF1AKMT3Q96AZ1 226 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 PINX1Q96BK5 328 aaKnown RBP12.21□□□□□ -0.45
APOE-205ENST00000485628 HYLS1Q96M11 299 aa12.21□□□□□ -0.45
APOE-205ENST00000485628 IGKV1D-37A0A075B6S9 117 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 IGHV3-21A0A0B4J1V1 117 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 CLN5O75503 358 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 TRBV12-3P01733 135 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 IGHV3-48P01763 117 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 CTSGP08311 255 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 CXCL2P19875 107 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 ADMP35318 185 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 SLC38A11Q08AI6 406 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 ATP6V1FQ16864 119 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 STX12Q86Y82 276 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 C11orf44Q8N8P7 122 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 WFDC1Q9HC57 220 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 S4R3C0 116 aa12.2□□□□□ -0.46
APOE-205ENST00000485628 IGKV1-17P01599 117 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 IGHV3-11P01762 117 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 CLEC3BP05452 202 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 IGLC1P0CG04 106 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 RND2P52198 227 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 HBG1P69891 147 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 HBG2P69892 147 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 OR2F1Q13607 317 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 FHL3Q13643 280 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 TREML4Q6UXN2 200 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 KCNRGQ8N5I3 272 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 TMEM217Q8N7C4 229 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 NPIPB3Q92617 1050 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
APOE-205ENST00000485628 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
APOE-205ENST00000485628 BMPR1BO00238 502 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 ARPC5O15511 151 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 IGHV3-23P01764 117 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 LGALSLQ3ZCW2 172 aaPredicted RBP12.18□□□□□ -0.46
APOE-205ENST00000485628 LAMTOR1Q6IAA8 161 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 INO80EQ8NBZ0 244 aaPredicted RBP12.18□□□□□ -0.46
APOE-205ENST00000485628 OR1S2Q8NGQ3 325 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 CHRDL1Q9BU40 450 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 PARD6GQ9BYG4 376 aaPredicted RBP12.18□□□□□ -0.46
APOE-205ENST00000485628 MFFQ9GZY8 342 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
APOE-205ENST00000485628 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
APOE-205ENST00000485628 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
APOE-205ENST00000485628 TGOLN2O43493 480 aa12.17□□□□□ -0.46
APOE-205ENST00000485628 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
APOE-205ENST00000485628 NPBWR1P48145 328 aa12.17□□□□□ -0.46
APOE-205ENST00000485628 ACSM6Q6P461 480 aa12.17□□□□□ -0.46
APOE-205ENST00000485628 SPSB3Q6PJ21 355 aa12.17□□□□□ -0.46
APOE-205ENST00000485628 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
APOE-205ENST00000485628 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
APOE-205ENST00000485628 CYTL1Q9NRR1 136 aa12.17□□□□□ -0.46
APOE-205ENST00000485628 TRAV30A0A087WSZ9 112 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 A0A0D9SG52 128 aa12.16□□□□□ -0.46
APOE-205ENST00000485628 OR2T8A6NH00 312 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms