RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	MPTX1	A8MV57	137 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	DNASE2	O00115	360 aa	Predicted RBP	7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	DFFB	O76075	338 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	NPBWR1	P48145	328 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	RND3	P61587	244 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	RPL11	P62913	178 aa	Known RBP	7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	TRIM16L	Q309B1	348 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	SCGB2B2	Q4G0G5	96 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	FAM90A2P	Q658T7	463 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	LHFPL1	Q86WI0	220 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	SLC35G3	Q8N808	338 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	RARRES2	Q99969	163 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	COPZ2	Q9P299	210 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	MTFP1	Q9UDX5	166 aa		7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.77	□□□□□ -1.17
HMGN1-215	ENST00000485550		A0A1B0GU03	582 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	TMEM50A	O95807	157 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	GHRH	P01286	108 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	H2AFB1	P0C5Y9	115 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	H2AFB2	P0C5Z0	115 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	RNASE2	P10153	161 aa	Known RBP	7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	ZNF182	P17025	639 aa	Predicted RBP	7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	HOXA1	P49639	335 aa	Predicted RBP	7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	CMC4	P56277	68 aa	Predicted RBP	7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	DEFB131A	P59861	70 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	PAFAH1B2	P68402	229 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	CTF1	Q16619	201 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	GPR107	Q5VW38	600 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	LEMD1	Q68G75	181 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	FAAP20	Q6NZ36	180 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	ARRDC1	Q8N5I2	433 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	FAM24B	Q8N5W8	94 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	OR13C8	Q8NGS7	320 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	RNASE11	Q8TAA1	199 aa	Known RBP	7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	MARCH1	Q8TCQ1	289 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	ZNF486	Q96H40	463 aa	Predicted RBP	7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	GINS3	Q9BRX5	216 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	PDCD10	Q9BUL8	212 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	MS4A6A	Q9H2W1	248 aa		7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	MRPL36	Q9P0J6	103 aa	Known RBP	7.76	□□□□□ -1.17
HMGN1-215	ENST00000485550	DEFB4A	O15263	64 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	RAB3D	O95716	219 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550		P0C879	139 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	OPRK1	P41145	380 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	SUB1	P53999	127 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	ZNF600	Q6ZNG1	722 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550		Q6ZRM9	215 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	TMEM217	Q8N7C4	229 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	TMEM229B	Q8NBD8	167 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	OR11H2	Q8NH07	326 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	TERB2	Q8NHR7	220 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	ZFAND1	Q8TCF1	268 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	PHLDA1	Q8WV24	401 aa	Predicted RBP	7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	AP3S1	Q92572	193 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	RRNAD1	Q96FB5	475 aa	Known RBP	7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	KRTAP4-5	Q9BYR2	181 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	FNDC4	Q9H6D8	234 aa	Predicted RBP	7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	VSIR	Q9H7M9	311 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	ENY2	Q9NPA8	101 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	RABAC1	Q9UI14	185 aa		7.75	□□□□□ -1.17
HMGN1-215	ENST00000485550	DNAH6	Q9C0G6	4158 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	CTDSP2	O14595	271 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	RGS5	O15539	181 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	ATG12	O94817	140 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	GABARAP	O95166	117 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	CA1	P00915	261 aa	Predicted RBP	7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	SMIM18	P0DKX4	95 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	MED14OS	P0DP75	135 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	TAS2R19	P59542	299 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	NANOS2	P60321	138 aa	Known RBP	7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	STEAP1B	Q6NZ63	245 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	CCDC71L	Q8N9Z2	235 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	TMEM230	Q96A57	120 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	MIXL1	Q9H2W2	232 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	FBXL17	Q9UF56	701 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	ABCA13	Q86UQ4	5058 aa		7.74	□□□□□ -1.17
HMGN1-215	ENST00000485550	PKHD1	P08F94	4074 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	INS-IGF2	F8WCM5	200 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	CLN5	O75503	358 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	NXPH3	O95157	252 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	CD74	P04233	296 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	OR5AC1	P0C628	307 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	TBP	P20226	339 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	NPPC	P23582	126 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	UCP1	P25874	307 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	TIGIT	Q495A1	244 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	PVRIG	Q6DKI7	326 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	STXBP6	Q8NFX7	210 aa		7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	RTBDN	Q9BSG5	229 aa	Predicted RBP	7.73	□□□□□ -1.17
HMGN1-215	ENST00000485550	CORT	O00230	105 aa		7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	CD5	P06127	495 aa		7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	ATF4	P18848	351 aa	Predicted RBP	7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	TMEM187	Q14656	261 aa		7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	MEF2D	Q14814	521 aa		7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	SPCS2	Q15005	226 aa		7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	STH	Q8IWL8	128 aa		7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	SELENOH	Q8IZQ5	122 aa	Known RBP	7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	OR4X1	Q8NH49	305 aa		7.72	□□□□□ -1.17
HMGN1-215	ENST00000485550	LHFPL5	Q8TAF8	219 aa		7.72	□□□□□ -1.17

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