RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 NR2C2APQ86WQ0 139 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 OR10W1Q8NGF6 305 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 OR11H2Q8NH07 326 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 OR51H1Q8NH63 302 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 SCARB1Q8WTV0 552 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 LSM10Q969L4 123 aaKnown RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 ABHD1Q96SE0 405 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 HINT2Q9BX68 163 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 VCX3BQ9H321 246 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 C11orf68Q9H3H3 251 aaKnown RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 HRH4Q9H3N8 390 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 RHBDL2Q9NX52 303 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 COMMD9Q9P000 198 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 SMPXQ9UHP9 88 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 DAPK2Q9UIK4 370 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 RRP15Q9Y3B9 282 aaKnown RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 F11RQ9Y624 299 aaKnown RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 TRAV18A0A075B6X5 111 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 IGHV3OR16-8A0A075B7F1 116 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 A0A0A6YYH2 397 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 IGHV3-21A0A0B4J1V1 117 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 TEX50A0A1B0GTY4 177 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 A6NJ64 397 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 CD5P06127 495 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 EIF4EP06730 217 aaKnown RBP4.3□□□□□ -1.72
CSDE1-207ENST00000483407 FGF9P31371 208 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-207ENST00000483407 CBX5P45973 191 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 TFPI2P48307 235 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 HSPA13P48723 471 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 NANOS2P60321 138 aaKnown RBP4.3□□□□□ -1.72
CSDE1-207ENST00000483407 WT1-ASQ06250 92 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 SFXN4Q6P4A7 337 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 ZNF818PQ6ZRF7 136 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 TMEM17Q86X19 198 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 HOGA1Q86XE5 327 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 CENPSQ8N2Z9 138 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 GVQW1Q8N7I0 195 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 TSPAN14Q8NG11 270 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 OR5AP2Q8NGF4 316 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 MPLKIPQ8TAP9 179 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 LGALS14Q8TCE9 139 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 GIMAP1Q8WWP7 306 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 TMEM56Q96MV1 263 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 RNF2Q99496 336 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 CHRDL1Q9BU40 450 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 RHPN1-AS1Q9BWJ2 59 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 DIABLOQ9NR28 239 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 NDUFA4L2Q9NRX3 87 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 FKBP11Q9NYL4 201 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 PRNDQ9UKY0 176 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 SSR3Q9UNL2 185 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 OR51B2Q9Y5P1 312 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 ETV7Q9Y603 341 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 ALMS1Q8TCU4 4167 aa4.3□□□□□ -1.72
CSDE1-207ENST00000483407 FRAS1Q86XX4 4008 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 IGKV3-7A0A075B6H7 116 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 TRAV14DV4A0A0A6YYC5 116 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 IGHV7-4-1A0A0J9YVY3 117 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 C11orf94C9JXX5 98 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 K7EIM0 57 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 DNASE2O00115 360 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-207ENST00000483407 CHEK1O14757 476 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 DFFBO76075 338 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 CA1P00915 261 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-207ENST00000483407 KRASP01116 189 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 RLN1P04808 185 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 FCER2P06734 321 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 PTHLHP12272 177 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 ANXA7P20073 488 aaKnown RBP4.29□□□□□ -1.72
CSDE1-207ENST00000483407 F2RP25116 425 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 PSMB9P28065 219 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 S100GP29377 79 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 PPP5CP53041 499 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 TMEM187Q14656 261 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 GGNBP1Q5YKI7 109 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 ZNF773Q6PK81 442 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 CMTM1Q8IZ96 169 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 OR1P1Q8NH06 330 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 PRSS3P2Q8NHM4 247 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 FCGR1BQ92637 280 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 SLC25A46Q96AG3 418 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 OR10C1Q96KK4 312 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 CNBD2Q96M20 576 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 TSC22D3Q99576 134 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 TXN2Q99757 166 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 GINS3Q9BRX5 216 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 IFT46Q9NQC8 304 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 TXNL4BQ9NX01 149 aaKnown RBP4.29□□□□□ -1.72
CSDE1-207ENST00000483407 EHFQ9NZC4 300 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 NSG2Q9Y328 171 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 HERC1Q15751 4861 aa4.29□□□□□ -1.72
CSDE1-207ENST00000483407 IGHV3-49A0A0A0MS15 119 aa4.28□□□□□ -1.72
CSDE1-207ENST00000483407 IGLL5B9A064 214 aa4.28□□□□□ -1.72
CSDE1-207ENST00000483407 VCYO14598 125 aa4.28□□□□□ -1.72
CSDE1-207ENST00000483407 GNG7O60262 68 aa4.28□□□□□ -1.72
CSDE1-207ENST00000483407 PGLYRP1O75594 196 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-207ENST00000483407 CTSGP08311 255 aa4.28□□□□□ -1.72
CSDE1-207ENST00000483407 GNRHRP30968 328 aa4.28□□□□□ -1.72
CSDE1-207ENST00000483407 SDC2P34741 201 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms