RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 LSM4Q9Y4Z0 139 aaKnown RBP6.44□□□□□ -1.38
USP4-210ENST00000483212 IGKV1D-37A0A075B6S9 117 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 IGKV1OR2-108A0A075B7D4 117 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 UBE2L5PA0A1B0GUS4 154 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 F8W735 103 aaPredicted RBP6.43□□□□□ -1.38
USP4-210ENST00000483212 H3BUA1 57 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 NDUFB8O95169 186 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 C4BPBP20851 252 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 DEFA5Q01523 94 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 EXOSC2Q13868 293 aaKnown RBP6.43□□□□□ -1.38
USP4-210ENST00000483212 ZNF266Q14584 549 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 SLC25A24Q6NUK1 477 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 BAP18Q8IXM2 172 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 TMEM116Q8NCL8 245 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 OR2T6Q8NHC8 308 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 WIPF2Q8TF74 440 aaPredicted RBP6.43□□□□□ -1.38
USP4-210ENST00000483212 MISP3Q96FF7 219 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
USP4-210ENST00000483212 RFNGQ9Y644 331 aa6.43□□□□□ -1.38
USP4-210ENST00000483212 BORCS7-ASMTA0A0B4J1R7 106 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 MFSD2BA6NFX1 497 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 OR2J3O76001 311 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 IGHV3-48P01763 117 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 IGHG4P01861 327 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 SPP1P10451 314 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 DEFA4P12838 97 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 TPT1P13693 172 aaKnown RBP6.42□□□□□ -1.38
USP4-210ENST00000483212 HIST1H1BP16401 226 aaKnown RBP6.42□□□□□ -1.38
USP4-210ENST00000483212 ATP6V0CP27449 155 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 OPRK1P41145 380 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 RUNX1Q01196 453 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 TEX261Q6UWH6 196 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 C10orf99Q6UWK7 81 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 TMEM144Q7Z5S9 345 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 CENPVQ7Z7K6 275 aaPredicted RBP6.42□□□□□ -1.38
USP4-210ENST00000483212 THAP8Q8NA92 274 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 HSD17B11Q8NBQ5 300 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 SCARB1Q8WTV0 552 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 ZNF414Q96IQ9 312 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 JMJD8Q96S16 334 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 MGST2Q99735 147 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 KRTAP4-12Q9BQ66 201 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 SH3BGRL3Q9H299 93 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 C16orf95Q9H693 158 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 SLA2Q9H6Q3 261 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 NPVFQ9HCQ7 196 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 FBXL7Q9UJT9 491 aa6.42□□□□□ -1.38
USP4-210ENST00000483212 IGHV3-21A0A0B4J1V1 117 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 RPS10-NUDT3A0A1W2PQS6 291 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 TMEM89A2RUT3 159 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 RGS13O14921 159 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 TCF21O43680 179 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 MPDU1O75352 247 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 NDUFA7O95182 113 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 IFNA5P01569 189 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 FGF7P21781 194 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 PSMB8P28062 276 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 FCGR2BP31994 310 aaPredicted RBP6.41□□□□□ -1.38
USP4-210ENST00000483212 RND2P52198 227 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 RHOGP84095 191 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 KIAA0141Q14154 515 aaPredicted RBP6.41□□□□□ -1.38
USP4-210ENST00000483212 ETFRF1Q6IPR1 90 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 BTNL8Q6UX41 500 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 RNF152Q8N8N0 203 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 NECAP1Q8NC96 275 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 ZNF680Q8NEM1 530 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 OR4X1Q8NH49 305 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 ZNF502Q8TBZ5 544 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 MYOZ3Q8TDC0 251 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 VN1R17PQ8TDU5 208 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 NPIPB3Q92617 1050 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 PHYHIPLQ96FC7 376 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 SLC35E1Q96K37 410 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 RSG1Q9BU20 258 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 GGTLC1Q9BX51 225 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 NPCDR1Q9BY65 106 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 KLK15Q9H2R5 256 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 THYN1Q9P016 225 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 TIMM9Q9Y5J7 89 aa6.41□□□□□ -1.38
USP4-210ENST00000483212 NF1P21359 2839 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 SMCO3A2RU48 225 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 FAM223BA6NKX1 122 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 CYB5BO43169 146 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 CLN5O75503 358 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 SEC11BP0C7V7 166 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 IGLC1P0CG04 106 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 EIF5AP63241 154 aaKnown RBP6.4□□□□□ -1.38
USP4-210ENST00000483212 SRSF2Q01130 221 aaKnown RBP6.4□□□□□ -1.38
USP4-210ENST00000483212 C15orf32Q32M92 178 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 TEPPQ6URK8 271 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 ALKAL2Q6UX46 152 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 TMEM182Q6ZP80 229 aaPredicted RBP6.4□□□□□ -1.38
USP4-210ENST00000483212 ZNF329Q86UD4 541 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 FAM223AQ8IWN6 122 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 OR2G3Q8NGZ4 309 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 TMED6Q8WW62 240 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 GNPNAT1Q96EK6 184 aaPredicted RBP6.4□□□□□ -1.38
USP4-210ENST00000483212 ACY3Q96HD9 319 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 CCDC140Q96MF4 163 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 MS4A10Q96PG2 267 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms