RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 PRR31Q5SQ13 230 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 PRAMEF5Q5TYX0 476 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 Q6P435 159 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 TOMM20LQ6UXN7 152 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 TBC1D26Q86UD7 250 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 DYNAPQ8N1N2 210 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 PLPPR1Q8TBJ4 325 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 YPEL2Q96QA6 119 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 RAB40CQ96S21 281 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 ELOVL1Q9BW60 279 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 AURKAIP1Q9NWT8 199 aaPredicted RBP8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 TBL2Q9Y4P3 447 aaKnown RBP8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 IGHV2-26A0A0B4J1V2 119 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 SLC25A6P12236 298 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 PSMB3P49720 205 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 RAB7AP51149 207 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 FGF8P55075 233 aaPredicted RBP8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 PAX9P55771 341 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 RBX1P62877 108 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 TPTE2P1Q5T6R2 138 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 OR11H6Q8NGC7 330 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 CMTM2Q8TAZ6 248 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 VAMP8Q9BV40 100 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 CLEC7AQ9BXN2 247 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 TMEM133Q9H2Q1 129 aa8.09□□□□□ -1.11
HLA-DQA1-206ENST00000482745 ODAMA1E959 279 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 C20orf202A1L168 122 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 FAM90A8PA6NJQ4 464 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 MMP23AO75900 390 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 PROK1P58294 105 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TPPP2P59282 170 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 SELENOTP62341 195 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 PIGYQ3MUY2 71 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 LDLRAD2Q5SZI1 272 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 LEMD1Q68G75 181 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 SLC35E4Q6ICL7 350 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 RPUSD4Q96CM3 377 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 COQ2Q96H96 371 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 SLC35E1Q96K37 410 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 RSG1Q9BU20 258 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 PARLQ9H300 379 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 C16orf95Q9H693 158 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 HILPDAQ9Y5L2 63 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TRAPPC1Q9Y5R8 145 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 IL3RAP26951 378 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 GNRHRP30968 328 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 CDKN1BP46527 198 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 KRTAP10-3P60369 221 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 HBG1P69891 147 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 HBG2P69892 147 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 ASCL4Q6XD76 172 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 OR4C13Q8NGP0 309 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 MRPL30Q8TCC3 161 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 CITED1Q99966 193 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 VSIRQ9H7M9 311 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 PXMP4Q9Y6I8 212 aa8.08□□□□□ -1.12
HLA-DQA1-206ENST00000482745 H0Y980 276 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 ESDP10768 282 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 BATFQ16520 125 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 Q6ZS49 121 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TMEM144Q7Z5S9 345 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TMEM219Q86XT9 240 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 OR4B1Q8NGF8 309 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 PIFOQ8TCI5 191 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 SIGLEC9Q9Y336 463 aa8.07□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TRAV39A0A0B4J263 110 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TRAV24A0A0B4J272 114 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 K7EP13 123 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 F2RL2O00254 374 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 PDCD6O75340 191 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 RPP30P78346 268 aaKnown RBP8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 MINOS1Q5TGZ0 78 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 ABHD12Q8N2K0 398 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TMEM256Q8N2U0 113 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 CORO2AQ92828 525 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 IL36GQ9NZH8 169 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TCF19Q9Y242 345 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 ST3GAL6Q9Y274 331 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 MINOS1-NBL1R4GNA1 71 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 OR7C1O76099 320 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 HTR1DP28221 377 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 RBM11P57052 281 aaKnown RBP8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TMEM267Q0VDI3 215 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 SRSF7Q16629 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 CST9LP1Q5W188 147 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 Q6ZWC4 215 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 OSR2Q8N2R0 312 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 OR4P4Q8NGL7 312 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 OR2T6Q8NHC8 308 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 NPFFR1Q9GZQ6 430 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 ZNF581Q9P0T4 197 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 PAM16Q9Y3D7 125 aa8.06□□□□□ -1.12
HLA-DQA1-206ENST00000482745 M0QZ24 198 aa8.05□□□□□ -1.12
HLA-DQA1-206ENST00000482745 TIMM23O14925 209 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms