RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 DOHHQ9BU89 302 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 YIPF3Q9GZM5 350 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 PRTFDC1Q9NRG1 225 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 SSR3Q9UNL2 185 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 MYH9P35579 1960 aaKnown RBP2.14□□□□□ -2.07
SF3B1-210ENST00000482158 RALGAPA2Q2PPJ7 1873 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 DSCAMO60469 2012 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 RTL1A6NKG5 1358 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 ROBO3Q96MS0 1386 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SORL1Q92673 2214 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 THSD7AQ9UPZ6 1657 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 C5orf49A4QMS7 147 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 TMEM189A5PLL7 270 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SIGLEC16A6NMB1 481 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 H7C1C5 153 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 K7ERU9 68 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 OVOL1O14753 267 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SLC22A1O15245 554 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 IGLV3-27P01718 113 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SERPINE1P05121 402 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 CRYBA1P05813 215 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 LGALS1P09382 135 aaKnown RBP2.13□□□□□ -2.07
SF3B1-210ENST00000482158 RPL7P18124 248 aaKnown RBP2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SRIP30626 198 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 OPRM1P35372 400 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 DAPP51397 102 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 EMP1P54849 157 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 TSPEAR-AS2P59090 65 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 DEFA1P59665 94 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 DAD1P61803 113 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SNRPD2P62316 118 aaKnown RBP2.13□□□□□ -2.07
SF3B1-210ENST00000482158 LCN6P62502 163 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 RPS28P62857 69 aaKnown RBP2.13□□□□□ -2.07
SF3B1-210ENST00000482158 TNFAIP6P98066 277 aaPredicted RBP2.13□□□□□ -2.07
SF3B1-210ENST00000482158 PLCXD2Q0VAA5 305 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 TMEM267Q0VDI3 215 aaPredicted RBP2.13□□□□□ -2.07
SF3B1-210ENST00000482158 KCNJ8Q15842 424 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 LTC4SQ16873 150 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 TNFAIP8L3Q5GJ75 292 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 LCN8Q6JVE9 175 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 HAGHLQ6PII5 290 aaPredicted RBP2.13□□□□□ -2.07
SF3B1-210ENST00000482158 C20orf196Q8IYI0 205 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 ZNF283Q8N7M2 679 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SLC30A7Q8NEW0 376 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 ZNF675Q8TD23 568 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 CT55Q8WUE5 264 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 MBD3L1Q8WWY6 194 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 KLK6Q92876 244 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 CNBD2Q96M20 576 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 PBDC1Q9BVG4 233 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 CHST6Q9GZX3 395 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 MED28Q9H204 178 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 CXCL16Q9H2A7 254 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 HES4Q9HCC6 221 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 FAIMQ9NVQ4 179 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 SPANXCQ9NY87 97 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 GNG8Q9UK08 70 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 DNAJC12Q9UKB3 198 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 U3KQ87 197 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 ZNF609O15014 1411 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 FER1L6Q2WGJ9 1857 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 ANKRD31Q8N7Z5 1873 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 DENND4CQ5VZ89 1909 aa2.13□□□□□ -2.07
SF3B1-210ENST00000482158 TONSLQ96HA7 1378 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 MED23Q9ULK4 1368 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 LINC00862A6NCI5 91 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 PIAS1O75925 651 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 DBIP07108 87 aaKnown RBP2.12□□□□□ -2.07
SF3B1-210ENST00000482158 TSPAN19P0C672 248 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 KDELR1P24390 212 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 HSPA9P38646 679 aaKnown RBP2.12□□□□□ -2.07
SF3B1-210ENST00000482158 RPL35P42766 123 aaKnown RBP2.12□□□□□ -2.07
SF3B1-210ENST00000482158 LPAR6P43657 344 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 AKR1D1P51857 326 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 POLR2HP52434 150 aaKnown RBP2.12□□□□□ -2.07
SF3B1-210ENST00000482158 FABP5Q01469 135 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 NEDD8Q15843 81 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 C12orf74Q32Q52 190 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 MORN2Q502X0 79 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 RASL11AQ6T310 242 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 SCIMPQ6UWF3 145 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 SBSNQ6UWP8 590 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 TSTD1Q8NFU3 115 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 OR4C6Q8NH72 309 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 GPR146Q96CH1 333 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 ABHD14BQ96IU4 210 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 TSPAN32Q96QS1 320 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 OR7D2Q96RA2 312 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 TMEM70Q9BUB7 260 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 TMEM147Q9BVK8 224 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 TTTY12Q9BZ98 90 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 C20orf27Q9GZN8 174 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 POPDC3Q9HBV1 291 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 NIT2Q9NQR4 276 aa2.12□□□□□ -2.07
SF3B1-210ENST00000482158 DCCP43146 1447 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 DOCK4Q8N1I0 1966 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 A0A087WUU8 490 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 MUC21A0A0G2JKD1 596 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 MUC21A0A140T8X8 626 aa2.11□□□□□ -2.07
SF3B1-210ENST00000482158 LY6LH3BQJ8 138 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms