RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 A0A0B4J2A0 478 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 RPS10-NUDT3A0A1W2PQS6 291 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 VAMP1P23763 118 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 CCR6P51684 374 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
OPTN-210ENST00000482140 HAGHQ16775 308 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 TMEM128Q5BJH2 165 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 GINS3Q9BRX5 216 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 WFDC10AQ9H1F0 79 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 SHPKQ9UHJ6 478 aa11.13□□□□□ -0.63
OPTN-210ENST00000482140 SMCO1Q147U7 214 aa11.12□□□□□ -0.63
OPTN-210ENST00000482140 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
OPTN-210ENST00000482140 LYZL2Q7Z4W2 148 aa11.12□□□□□ -0.63
OPTN-210ENST00000482140 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
OPTN-210ENST00000482140 SLC24A4Q8NFF2 622 aa11.12□□□□□ -0.63
OPTN-210ENST00000482140 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
OPTN-210ENST00000482140 TRAV14DV4A0A0A6YYC5 116 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 TSPAN4O14817 238 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 BMI1P35226 326 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 RBMS2Q15434 407 aaKnown RBP11.11□□□□□ -0.63
OPTN-210ENST00000482140 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 C2orf83Q53S99 150 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 ZNF600Q6ZNG1 722 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 CENPSQ8N2Z9 138 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 OR10C1Q96KK4 312 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 FNDC4Q9H6D8 234 aaPredicted RBP11.11□□□□□ -0.63
OPTN-210ENST00000482140 SMPXQ9UHP9 88 aa11.11□□□□□ -0.63
OPTN-210ENST00000482140 IGHV3-49A0A0A0MS15 119 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 NAP1L6A6NFF2 107 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 CLN5O75503 358 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 TMEM50AO95807 157 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 NPY1RP25929 384 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 TNFRSF9Q07011 255 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 BAK1Q16611 211 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 NMSQ5H8A3 153 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 TOMM20LQ6UXN7 152 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 OR4X1Q8NH49 305 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
OPTN-210ENST00000482140 RHPN1-AS1Q9BWJ2 59 aa11.1□□□□□ -0.63
OPTN-210ENST00000482140 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
OPTN-210ENST00000482140 TRAV30A0A087WSZ9 112 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 A0A1B0GU03 582 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 LINC00854A0A1B0GVQ3 168 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 OR4C46A6NHA9 309 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 CENPXA8MT69 81 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 CHEK1O14757 476 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 IFNA10P01566 189 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 SLC25A4P12235 298 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 PPP1R1AQ13522 171 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 MLANAQ16655 118 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 ETFRF1Q6IPR1 90 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 RBKSQ9H477 322 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 HSPB7Q9UBY9 170 aa11.09□□□□□ -0.63
OPTN-210ENST00000482140 IGHV3OR16-13A0A075B7E8 117 aa11.08□□□□□ -0.64
OPTN-210ENST00000482140 IGHV3-74A0A0B4J1X5 117 aa11.08□□□□□ -0.64
OPTN-210ENST00000482140 RBMY1BA6NDE4 496 aaKnown RBP11.08□□□□□ -0.64
OPTN-210ENST00000482140 RBMY1EA6NEQ0 496 aaKnown RBP11.08□□□□□ -0.64
OPTN-210ENST00000482140 SFT2D2O95562 160 aa11.08□□□□□ -0.64
OPTN-210ENST00000482140 RBMY1DP0C7P1 496 aaKnown RBP11.08□□□□□ -0.64
OPTN-210ENST00000482140 LINC00322Q6ZN03 302 aaPredicted RBP11.08□□□□□ -0.64
OPTN-210ENST00000482140 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
OPTN-210ENST00000482140 RNF2Q99496 336 aa11.08□□□□□ -0.64
OPTN-210ENST00000482140 MRPL36Q9P0J6 103 aaKnown RBP11.08□□□□□ -0.64
OPTN-210ENST00000482140 UBQLN2Q9UHD9 624 aa11.08□□□□□ -0.64
OPTN-210ENST00000482140 U3KQ87 197 aa11.08□□□□□ -0.64
OPTN-210ENST00000482140 HUWE1Q7Z6Z7 4374 aaKnown RBP11.07□□□□□ -0.64
OPTN-210ENST00000482140 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 RND2P52198 227 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 UBE2MP61081 183 aaKnown RBP11.07□□□□□ -0.64
OPTN-210ENST00000482140 TIGITQ495A1 244 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 LRTM2Q8N967 370 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 OR1S2Q8NGQ3 325 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 C7orf50Q9BRJ6 194 aaKnown RBP11.07□□□□□ -0.64
OPTN-210ENST00000482140 GGTLC1Q9BX51 225 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 TMEM231Q9H6L2 316 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 TMED3Q9Y3Q3 217 aa11.07□□□□□ -0.64
OPTN-210ENST00000482140 LOC102724200A0A096LPH7 203 aaPredicted RBP11.06□□□□□ -0.64
OPTN-210ENST00000482140 C3orf84H3BNL1 204 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 NDUFB6O95139 128 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 IFNA4P05014 189 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 CD5P06127 495 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 IL7P13232 177 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 NPPCP23582 126 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 TFPI2P48307 235 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 PRSS54Q6PEW0 395 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 NARS2Q96I59 477 aaKnown RBP11.06□□□□□ -0.64
OPTN-210ENST00000482140 CITED4Q96RK1 184 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 METTL26Q96S19 204 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 SDHCQ99643 169 aaPredicted RBP11.06□□□□□ -0.64
OPTN-210ENST00000482140 RETNQ9HD89 108 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
OPTN-210ENST00000482140 A0A1W2PS18 150 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms