RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 ST6GALNAC3Q8NDV1 305 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 MISP3Q96FF7 219 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 HSPB9Q9BQS6 159 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 NGBQ9NPG2 151 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 CUL9Q8IWT3 2517 aa12.43□□□□□ -0.42
C9orf3-218ENST00000482056 SMIM27A0A1W2PRY6 76 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 IGLV2-8P01709 118 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 BRS3P32247 399 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 LGALS7P47929 136 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 ZNF137PP52743 207 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 WT1-ASQ06250 92 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 TOMM20LQ6UXN7 152 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
C9orf3-218ENST00000482056 NPIPB3Q92617 1050 aa12.42□□□□□ -0.42
C9orf3-218ENST00000482056 AMMECR1Q9Y4X0 333 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-218ENST00000482056 TRAV5A0A0B4J249 113 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 TMEM136Q6ZRR5 245 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 Q6ZWC4 215 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 STXBP6Q8NFX7 210 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 C22orf15Q8WYQ4 148 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 CHRDL1Q9BU40 450 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 DYNLRB1Q9NP97 96 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 NBEAQ8NFP9 2946 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 IZUMO1RA6ND01 250 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 IGLV2-23P01705 113 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 THBDP07204 575 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 TCL1AP56279 114 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 LINC00310P59036 64 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 ZNF331Q9NQX6 463 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-218ENST00000482056 ZNF586Q9NXT0 402 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 KAAG1Q9UBP8 84 aa12.41□□□□□ -0.42
C9orf3-218ENST00000482056 E7EUB6 86 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 PEX7O00628 323 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 TNFRSF13BO14836 293 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-218ENST00000482056 SPINK4O60575 86 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 TMEM183BQ1AE95 376 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 RASL11AQ6T310 242 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 LYPD2Q6UXB3 125 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 FAM231DQ6ZW35 169 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 ZNF329Q86UD4 541 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 FNDC4Q9H6D8 234 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-218ENST00000482056 GNB4Q9HAV0 340 aa12.4□□□□□ -0.42
C9orf3-218ENST00000482056 CGB1A6NKQ9 187 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 M0R143 59 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 SLC25A17O43808 307 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 SSBP2P81877 361 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-218ENST00000482056 TMEM155Q4W5P6 130 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 C10orf55Q5SWW7 151 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 MORN5Q5VZ52 161 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 TEX43Q6ZNM6 134 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 RNASE6Q93091 150 aaKnown RBP12.39□□□□□ -0.43
C9orf3-218ENST00000482056 PERPQ96FX8 193 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 JKAMPQ9P055 326 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 RP1L1Q8IWN7 2480 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-218ENST00000482056 ENSAO43768 121 aaKnown RBP12.39□□□□□ -0.43
C9orf3-218ENST00000482056 FCN3O75636 299 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 PYYP10082 97 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 LOXP28300 417 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-218ENST00000482056 TDGF1P3P51864 188 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 DLX6P56179 175 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 MRPL54Q6P161 138 aaKnown RBP12.39□□□□□ -0.43
C9orf3-218ENST00000482056 TEX45Q8NA69 505 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 KCNS1Q96KK3 526 aa12.39□□□□□ -0.43
C9orf3-218ENST00000482056 APCSP02743 223 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 FRMD6-AS1P0C7T7 363 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 RNF224P0DH78 156 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 IGHV1-8P0DP01 117 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 TPTE2P1Q5T6R2 138 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 PATE2Q6UY27 113 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 LINC00305Q7Z4B0 112 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 MRPL52Q86TS9 123 aaKnown RBP12.38□□□□□ -0.43
C9orf3-218ENST00000482056 TNFRSF14Q92956 283 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 C20orf144Q9BQM9 153 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 CBLN4Q9NTU7 201 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 IGKV1D-37A0A075B6S9 117 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 A0A1W2PPI3 338 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 GPX1P07203 203 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 UBE2G1P62253 170 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 SLC35B1P78383 322 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 FXYD5Q96DB9 178 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 VAMP8Q9BV40 100 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 TMEM133Q9H2Q1 129 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 TNFRSF19Q9NS68 423 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 SH3BGRL2Q9UJC5 107 aa12.38□□□□□ -0.43
C9orf3-218ENST00000482056 F2Z2F3 143 aa12.37□□□□□ -0.43
C9orf3-218ENST00000482056 EREGO14944 169 aa12.37□□□□□ -0.43
C9orf3-218ENST00000482056 ZNF253O75346 499 aa12.37□□□□□ -0.43
C9orf3-218ENST00000482056 NHLRC2Q8NBF2 726 aa12.37□□□□□ -0.43
C9orf3-218ENST00000482056 WIPF2Q8TF74 440 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-218ENST00000482056 SMIM12Q96EX1 92 aa12.37□□□□□ -0.43
C9orf3-218ENST00000482056 TRGV9Q99603 122 aa12.37□□□□□ -0.43
C9orf3-218ENST00000482056 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
C9orf3-218ENST00000482056 M0QZK8 103 aa12.36□□□□□ -0.43
C9orf3-218ENST00000482056 CORTO00230 105 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms