RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PSMB3P49720 205 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 TEX36Q5VZQ5 186 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 UBL4BQ8N7F7 174 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 TMEM147Q9BVK8 224 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 C16orf95Q9H693 158 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 GLS2Q9UI32 602 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 CSAG2Q9Y5P2 127 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 TEX50A0A1B0GTY4 177 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 PDE6DO43924 150 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 SCGB1A1P11684 91 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 CD79AP11912 226 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 ATF1P18846 271 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 TNFAIP6P98066 277 aaPredicted RBP2.26□□□□□ -2.05
SMC6-208ENST00000481708 ABCA11PQ4W5N1 156 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 FAM78BQ5VT40 261 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 DCUN1D2Q6PH85 259 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 Q8N7P7 452 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 OR2T27Q8NH04 317 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 OR10A6Q8NH74 314 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 FNDC9Q8TBE3 224 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 ZNF721Q8TF20 911 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 C12orf43Q96C57 262 aaKnown RBP2.26□□□□□ -2.05
SMC6-208ENST00000481708 SCRT2Q9NQ03 307 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 ACER3Q9NUN7 267 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 RASL12Q9NYN1 266 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 WNK1Q9H4A3 2382 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 POLEQ07864 2286 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 IGKV3D-15A0A087WSY6 115 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 H3BSA7 217 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 FAM228BP0C875 321 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 PSG2P11465 335 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 GADD45AP24522 165 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 S100A2P29034 98 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 UBE2NP61088 152 aaKnown RBP2.26□□□□□ -2.05
SMC6-208ENST00000481708 SSX1Q16384 188 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 TIMM50Q3ZCQ8 353 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 MRPL2Q5T653 305 aaKnown RBP2.26□□□□□ -2.05
SMC6-208ENST00000481708 MOB1BQ7L9L4 216 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 Q8N2B8 174 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 OR5M11Q96RB7 305 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 DEFB126Q9BYW3 111 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 PTGES2Q9H7Z7 377 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 POPDC3Q9HBV1 291 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 FAM60AQ9NP50 221 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 PARP11Q9NR21 331 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 TRAPPC13A5PLN9 417 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 MAP1LC3B2A6NCE7 125 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 KRTAP16-1A8MUX0 517 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 ATG12O94817 140 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 IGLV1-44P01699 117 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 OPN1SWP03999 348 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 HLA-DQB2P05538 268 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 IMPA1P29218 277 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 S100GP29377 79 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 SLC18A1P54219 525 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 ENDOGQ14249 297 aaKnown RBP2.26□□□□□ -2.05
SMC6-208ENST00000481708 SMIM21Q3B7S5 101 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 C9orf129Q5T035 196 aaKnown RBP2.26□□□□□ -2.05
SMC6-208ENST00000481708 NXNL2Q5VZ03 156 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 ZNF613Q6PF04 617 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 WDR59Q6PJI9 974 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 MKXQ8IYA7 352 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 L3HYPDHQ96EM0 354 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 DNAJC30Q96LL9 226 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 KIFC1Q9BW19 673 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 MAP1LC3BQ9GZQ8 125 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 WASHC3Q9Y3C0 194 aa2.26□□□□□ -2.05
SMC6-208ENST00000481708 A0A1B0GVX0 72 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 ZNF705GA8MUZ8 300 aaPredicted RBP2.25□□□□□ -2.05
SMC6-208ENST00000481708 C1QCP02747 245 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 KLK2P20151 261 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 CNTFRP26992 372 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 DAD1P61803 113 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 PPP1CAP62136 330 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 IAH1Q2TAA2 248 aaPredicted RBP2.25□□□□□ -2.05
SMC6-208ENST00000481708 GOLT1AQ6ZVE7 132 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 UBAC2Q8NBM4 344 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 OR1J4Q8NGS1 313 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 SGMS2Q8NHU3 365 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 PAXXQ9BUH6 204 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 PARP12Q9H0J9 701 aaKnown RBP2.25□□□□□ -2.05
SMC6-208ENST00000481708 BIN3Q9NQY0 253 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 PLSCR3Q9NRY6 295 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 FAM49BQ9NUQ9 324 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 RPS6KB2Q9UBS0 482 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 IGLV7-46A0A075B6I9 117 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 IGKV2D-30A0A075B6S6 120 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 IGHV3-74A0A0B4J1X5 117 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 TRAV17A0A0B4J275 112 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 CXCL5P42830 114 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 EVX1P49640 407 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 DCDP81605 110 aaKnown RBP2.25□□□□□ -2.05
SMC6-208ENST00000481708 IFITM3Q01628 133 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 ZNF561Q8N587 486 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 ZNF433Q8N7K0 673 aaPredicted RBP2.25□□□□□ -2.05
SMC6-208ENST00000481708 OR51I2Q9H344 312 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 CXorf21Q9HAI6 301 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 TMEM38BQ9NVV0 291 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 LINC00527Q9UJ94 153 aa2.25□□□□□ -2.05
SMC6-208ENST00000481708 MXRA5Q9NR99 2828 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms