RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 OR5C1Q8NGR4 320 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 SCARB1Q8WTV0 552 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 EEF1AKMT3Q96AZ1 226 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 NOL4LQ96MY1 436 aaPredicted RBP6.44□□□□□ -1.38
SYNE1-225ENST00000481502 ATP5SQ99766 215 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 ZC4H2Q9NQZ6 224 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 KCNIP2Q9NS61 270 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 ZNF355PQ9NSJ1 428 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 UQCC1Q9NVA1 299 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 FBXL7Q9UJT9 491 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 RNF114Q9Y508 228 aa6.44□□□□□ -1.38
SYNE1-225ENST00000481502 KANTRA0A1W2PQU2 76 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 CLN5O75503 358 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 CST7O76096 145 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 IFNA5P01569 189 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 TRGV3P03979 118 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 HNRNPCP07910 306 aaKnown RBP eCLIP6.43□□□□□ -1.38
SYNE1-225ENST00000481502 S100A7P31151 101 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 GAMTQ14353 236 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 C15orf32Q32M92 178 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 LGALSLQ3ZCW2 172 aaPredicted RBP6.43□□□□□ -1.38
SYNE1-225ENST00000481502 PXDC1Q5TGL8 231 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 OR8G2PQ6IF36 304 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 EIF5AL1Q6IS14 154 aaKnown RBP6.43□□□□□ -1.38
SYNE1-225ENST00000481502 ZNF343Q6P1L6 599 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 TEPPQ6URK8 271 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 SLC16A13Q7RTY0 426 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 S100A7AQ86SG5 101 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 SLC51BQ86UW2 128 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 LILRB2Q8N423 598 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 ZNF491Q8N8L2 437 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 THAP8Q8NA92 274 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 OR5AU1Q8NGC0 362 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 ZNF502Q8TBZ5 544 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 TMEM158Q8WZ71 300 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 GNPNAT1Q96EK6 184 aaPredicted RBP6.43□□□□□ -1.38
SYNE1-225ENST00000481502 MISP3Q96FF7 219 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 BSCL2Q96G97 398 aaPredicted RBP6.43□□□□□ -1.38
SYNE1-225ENST00000481502 TRGV9Q99603 122 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 ARPC5LQ9BPX5 153 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 FNDC4Q9H6D8 234 aaPredicted RBP6.43□□□□□ -1.38
SYNE1-225ENST00000481502 C21orf62Q9NYP8 219 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 WDR83OSQ9Y284 106 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 LSM4Q9Y4Z0 139 aaKnown RBP6.43□□□□□ -1.38
SYNE1-225ENST00000481502 TIMM9Q9Y5J7 89 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 DMRT1Q9Y5R6 373 aa6.43□□□□□ -1.38
SYNE1-225ENST00000481502 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.42□□□□□ -1.38
SYNE1-225ENST00000481502 C17orf112F2Z3M2 114 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 SMLR1H3BR10 107 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 BCL2L11O43521 198 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 REG1AP05451 166 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 PF4V1P10720 104 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 CXCL2P19875 107 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 EIF2B2P49770 351 aaKnown RBP6.42□□□□□ -1.38
SYNE1-225ENST00000481502 TPPP2P59282 170 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 YPEL3P61236 119 aaPredicted RBP6.42□□□□□ -1.38
SYNE1-225ENST00000481502 SERF2P84101 59 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 CD300CQ08708 224 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 KIAA0141Q14154 515 aaPredicted RBP6.42□□□□□ -1.38
SYNE1-225ENST00000481502 TREML4Q6UXN2 200 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 TMUB2Q71RG4 321 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 HAPLN4Q86UW8 402 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 C9orf62Q8N4C0 152 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 TMEM217Q8N7C4 229 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 STOML3Q8TAV4 291 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 SCGB1C1Q8TD33 95 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 PSMG3Q9BT73 122 aaPredicted RBP6.42□□□□□ -1.38
SYNE1-225ENST00000481502 C19orf24Q9BVV8 132 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 ARL6Q9H0F7 186 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 ARV1Q9H2C2 271 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 LINC00527Q9UJ94 153 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 PAIP2BQ9ULR5 123 aaKnown RBP6.42□□□□□ -1.38
SYNE1-225ENST00000481502 RNF24Q9Y225 148 aa6.42□□□□□ -1.38
SYNE1-225ENST00000481502 TSSC4Q9Y5U2 329 aaPredicted RBP6.42□□□□□ -1.38
SYNE1-225ENST00000481502 NUPL2O15504 423 aaKnown RBP6.41□□□□□ -1.38
SYNE1-225ENST00000481502 GNG7O60262 68 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 OR2J3O76001 311 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 NDUFB8O95169 186 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 LGALS1P09382 135 aaKnown RBP6.41□□□□□ -1.38
SYNE1-225ENST00000481502 APELAP0DMC3 54 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 RPL29P47914 159 aaKnown RBP6.41□□□□□ -1.38
SYNE1-225ENST00000481502 RELQ04864 619 aaPredicted RBP6.41□□□□□ -1.38
SYNE1-225ENST00000481502 ARL16Q0P5N6 197 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 LAMTOR1Q6IAA8 161 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 ACSM6Q6P461 480 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 ZNF329Q86UD4 541 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 C4orf3Q8WVX3 66 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 PHYHIPLQ96FC7 376 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 WDR61Q9GZS3 305 aaKnown RBP6.41□□□□□ -1.38
SYNE1-225ENST00000481502 FBXL17Q9UF56 701 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 SLC45A2Q9UMX9 530 aa6.41□□□□□ -1.38
SYNE1-225ENST00000481502 NIPBLQ6KC79 2804 aaeCLIP6.41□□□□□ -1.38
SYNE1-225ENST00000481502 TCRBV4S1A1TA0A5B7 111 aa6.4□□□□□ -1.38
SYNE1-225ENST00000481502 I3L521 148 aa6.4□□□□□ -1.38
SYNE1-225ENST00000481502 GGCTO75223 188 aaKnown RBP6.4□□□□□ -1.38
SYNE1-225ENST00000481502 MBP02144 154 aa6.4□□□□□ -1.38
SYNE1-225ENST00000481502 PRH1P02810 166 aa6.4□□□□□ -1.38
SYNE1-225ENST00000481502 HSPB1P04792 205 aaKnown RBP6.4□□□□□ -1.38
SYNE1-225ENST00000481502 CLEC3BP05452 202 aa6.4□□□□□ -1.38
SYNE1-225ENST00000481502 CTSGP08311 255 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms