RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 C2orf83Q53S99 150 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 SLC16A13Q7RTY0 426 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 LRTM2Q8N967 370 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 SLC24A4Q8NFF2 622 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 SPAG8Q99932 426 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-207ENST00000481281 WFDC10AQ9H1F0 79 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 TUBA4BQ9H853 241 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 ZMAT4Q9H898 229 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-207ENST00000481281 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.85
HDAC1-207ENST00000481281 HSPB7Q9UBY9 170 aa9.77□□□□□ -0.85
HDAC1-207ENST00000481281 CEBPZOSA8MTT3 80 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 OR11H12B2RN74 326 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 TSPAN4O14817 238 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 ZNF207O43670 478 aaKnown RBP9.76□□□□□ -0.85
HDAC1-207ENST00000481281 TMEM50AO95807 157 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 OPRK1P41145 380 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 TNFRSF9Q07011 255 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 HAGHQ16775 308 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 ANKRD55Q3KP44 614 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 TRIQKQ629K1 86 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
HDAC1-207ENST00000481281 DEFB125Q8N687 156 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 OR52B4Q8NGK2 314 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 OR4X1Q8NH49 305 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 TMEM170AQ8WVE7 144 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 SMPXQ9UHP9 88 aa9.76□□□□□ -0.85
HDAC1-207ENST00000481281 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 A0A1B0GU03 582 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 NAP1L6A6NFF2 107 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 CLN5O75503 358 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 YIF1AO95070 293 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 NDUFB6O95139 128 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 NXPH3O95157 252 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 VAMP1P23763 118 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 PPP1R1AQ13522 171 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 MLANAQ16655 118 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 TOMM20LQ6UXN7 152 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 ZNF600Q6ZNG1 722 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 CENPSQ8N2Z9 138 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 RNASEH2CQ8TDP1 164 aaKnown RBP9.75□□□□□ -0.85
HDAC1-207ENST00000481281 SRD5A3Q9H8P0 318 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 ZFAND3Q9H8U3 227 aa9.75□□□□□ -0.85
HDAC1-207ENST00000481281 RPS10-NUDT3A0A1W2PQS6 291 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 RBMY1BA6NDE4 496 aaKnown RBP9.74□□□□□ -0.85
HDAC1-207ENST00000481281 RBMY1EA6NEQ0 496 aaKnown RBP9.74□□□□□ -0.85
HDAC1-207ENST00000481281 CHEK1O14757 476 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 PITX3O75364 302 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 SFT2D2O95562 160 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 RBMY1DP0C7P1 496 aaKnown RBP9.74□□□□□ -0.85
HDAC1-207ENST00000481281 IL7P13232 177 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 NPY1RP25929 384 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 BTCP35070 178 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 INPP1P49441 399 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 UBE2MP61081 183 aaKnown RBP9.74□□□□□ -0.85
HDAC1-207ENST00000481281 LAMTOR1Q6IAA8 161 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 TMEM116Q8NCL8 245 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 GINS3Q9BRX5 216 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 RHPN1-AS1Q9BWJ2 59 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 HIPK2Q9H2X6 1198 aa9.74□□□□□ -0.85
HDAC1-207ENST00000481281 HUWE1Q7Z6Z7 4374 aaKnown RBP9.73□□□□□ -0.85
HDAC1-207ENST00000481281 TRAV14DV4A0A0A6YYC5 116 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 IGKV1-17P01599 117 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 SLC25A4P12235 298 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 SLC25A6P12236 298 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 PRSS54Q6PEW0 395 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 NOXA1Q86UR1 476 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 DTD1Q8TEA8 209 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 RNF2Q99496 336 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 C7orf50Q9BRJ6 194 aaKnown RBP9.73□□□□□ -0.85
HDAC1-207ENST00000481281 RBKSQ9H477 322 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 TMED3Q9Y3Q3 217 aa9.73□□□□□ -0.85
HDAC1-207ENST00000481281 PUS1Q9Y606 427 aaKnown RBP eCLIP9.73□□□□□ -0.85
HDAC1-207ENST00000481281 TRAV30A0A087WSZ9 112 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 IGHV3-49A0A0A0MS15 119 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 OR4C46A6NHA9 309 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 SCGB2A1O75556 95 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 IGLC1P0CG04 106 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 RND2P52198 227 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 ODF3L2Q3SX64 289 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 FAM90A2PQ658T7 463 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 OR1S1Q8NH92 325 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 FAM110AQ9BQ89 295 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 VSIRQ9H7M9 311 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 U3KQ87 197 aa9.72□□□□□ -0.85
HDAC1-207ENST00000481281 LINC00854A0A1B0GVQ3 168 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 C9orf170A2RU37 121 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 FAM90A26D6RGX4 464 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 IFNA10P01566 189 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 ATP5IP56385 69 aaPredicted RBP9.71□□□□□ -0.86
HDAC1-207ENST00000481281 TIGITQ495A1 244 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 ETFRF1Q6IPR1 90 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 OR1S2Q8NGQ3 325 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 CITED4Q96RK1 184 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.86
HDAC1-207ENST00000481281 IGHV3OR16-13A0A075B7E8 117 aa9.7□□□□□ -0.86
HDAC1-207ENST00000481281 IGHV3-74A0A0B4J1X5 117 aa9.7□□□□□ -0.86
HDAC1-207ENST00000481281 CENPXA8MT69 81 aa9.7□□□□□ -0.86
HDAC1-207ENST00000481281 APOHP02749 345 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms