RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 PPP1R1CQ8WVI7 109 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 ARPC1AQ92747 370 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 CLCC1Q96S66 551 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 COMMD5Q9GZQ3 224 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 ZNF430Q9H8G1 570 aaPredicted RBP6.51□□□□□ -1.37
USP54-212ENST00000480210 TMEM242Q9NWH2 141 aa6.51□□□□□ -1.37
USP54-212ENST00000480210 ATRQ13535 2644 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 BORCS7-ASMTA0A0B4J1R7 106 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 TRAV41A0A0B4J266 112 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 A0A1W2PN81 502 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 PPP5D1E7EU14 171 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 ATP6V0E1O15342 81 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 LY86O95711 162 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 TSPAN15O95858 294 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 IGHG4P01861 327 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 G6PCP35575 357 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 CHRNA7P36544 502 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 OR2B8PP59922 312 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 SUPT4H1P63272 117 aaKnown RBP6.5□□□□□ -1.37
USP54-212ENST00000480210 FOXE3Q13461 319 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 SP6Q3SY56 376 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 TMEM268Q5VZI3 342 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 PRSS54Q6PEW0 395 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 UNQ5815/PRO19632Q6UWF5 114 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 Q6ZS46 218 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 KLHDC1Q8N7A1 406 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 SLC24A4Q8NFF2 622 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 OR5AU1Q8NGC0 362 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 OR1L6Q8NGR2 347 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 OR52E5Q8NH55 327 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 SVIPQ8NHG7 77 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 WIPF2Q8TF74 440 aaPredicted RBP6.5□□□□□ -1.37
USP54-212ENST00000480210 ABHD5Q8WTS1 349 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 SRSF12Q8WXF0 261 aaKnown RBP6.5□□□□□ -1.37
USP54-212ENST00000480210 HSPB9Q9BQS6 159 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 SLC35B3Q9H1N7 401 aa6.5□□□□□ -1.37
USP54-212ENST00000480210 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.5□□□□□ -1.37
USP54-212ENST00000480210 A0A1B0GU03 582 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 MSGN1A6NI15 193 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 C15orf61A6NNL5 157 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 INS-IGF2F8WCM5 200 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 M0R036 132 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 RBMXL2O75526 392 aaKnown RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 OR2C1O95371 312 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 IFNA21P01568 189 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 HLA-AP01891 365 aaKnown RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 SEC11BP0C7V7 166 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 P0C879 139 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 EGR2P11161 476 aaPredicted RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 PPIFP30405 207 aaKnown RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 SULT1A1P50225 295 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 HSPE1P61604 102 aaKnown RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 GNB1P62873 340 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 PNRC1Q12796 327 aaPredicted RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 DHRS2Q13268 280 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 PPP1R1AQ13522 171 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 JOSD1Q15040 202 aaPredicted RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 MRGPRG-AS1Q2M3A8 158 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 CXorf66Q5JRM2 361 aaPredicted RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 BTNL8Q6UX41 500 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 VKORC1L1Q8N0U8 176 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 TTC9CQ8N5M4 171 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 RNF152Q8N8N0 203 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 DCUN1D4Q92564 292 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 CITED1Q99966 193 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 QTRT1Q9BXR0 403 aaKnown RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 TMEM14BQ9NUH8 114 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 FOXA2Q9Y261 457 aaPredicted RBP6.49□□□□□ -1.37
USP54-212ENST00000480210 GOLT1BQ9Y3E0 138 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 OR51B2Q9Y5P1 312 aa6.49□□□□□ -1.37
USP54-212ENST00000480210 A0A0G2JLM5 398 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 TEX50A0A1B0GTY4 177 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 A0A1W2PPQ1 181 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 SH2D7A6NKC9 451 aaPredicted RBP6.48□□□□□ -1.37
USP54-212ENST00000480210 LINC01548A6NM66 108 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 NPIPB5A8MRT5 1133 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 A8MWP6 167 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 FAM90A26D6RGX4 464 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 ADAP1O75689 374 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 IGKV1-5P01602 117 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 CRYGCP07315 174 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 OR9G9P0C7N8 305 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 ATP5IP56385 69 aaPredicted RBP6.48□□□□□ -1.37
USP54-212ENST00000480210 ERHP84090 104 aaKnown RBP6.48□□□□□ -1.37
USP54-212ENST00000480210 CFHR3Q02985 330 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 TNFRSF9Q07011 255 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 CLINT1Q14677 625 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 IQCJQ1A5X6 159 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 KLK9Q2XQG4 91 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 AARDQ4LEZ3 155 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 PDLIM3Q53GG5 364 aaPredicted RBP6.48□□□□□ -1.37
USP54-212ENST00000480210 C19orf54Q5BKX5 351 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 PYY3Q5JQD4 70 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 NDUFA11Q86Y39 141 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 SLC35G3Q8N808 338 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 OR5T1Q8NG75 326 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 FAM110DQ8TAY7 271 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms