RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	DNAH10	Q8IVF4	4471 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	SYNGR2	O43760	224 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	SCAF4	O95104	1147 aa	Known RBP	11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	IGLV1-51	P01701	117 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	RLN2	P04090	185 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	ATP5G2	Q06055	141 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	WT1-AS	Q06250	92 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	OR10W1	Q8NGF6	305 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	OR5B12	Q96R08	314 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	RAB40C	Q96S21	281 aa		11.84	□□□□□ -0.51
HDLBP-238	ENST00000479894	CGB1	A6NKQ9	187 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894		E7EUB6	86 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	GOSR2	O14653	212 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	SCGB2A1	O75556	95 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	PET100	P0DJ07	73 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	APELA	P0DMC3	54 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	MYOD1	P15172	320 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	TAS2R30	P59541	319 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	EXOSC2	Q13868	293 aa	Known RBP	11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	SLC25A24	Q6NUK1	477 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	OR4D5	Q8NGN0	318 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	ATP6V0B	Q99437	205 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	NMES1	Q9C002	83 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	RBKS	Q9H477	322 aa		11.83	□□□□□ -0.52
HDLBP-238	ENST00000479894	TRBV9	A0A0B4J1U6	114 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894		A0A1B0GW64	132 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	IFNA10	P01566	189 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	RAB11A	P62491	216 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	RHOG	P84095	191 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	ETFRF1	Q6IPR1	90 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	SLC24A4	Q8NFF2	622 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	VN1R17P	Q8TDU5	208 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	OR10C1	Q96KK4	312 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	MS4A10	Q96PG2	267 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	ELOVL1	Q9BW60	279 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	TUBA4B	Q9H853	241 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	FBXL7	Q9UJT9	491 aa		11.82	□□□□□ -0.52
HDLBP-238	ENST00000479894	IGLV11-55	A0A075B6I3	123 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	TRBV7-1	A0A0A6YYK4	115 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894		L7N2F9	121 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	SOX15	O60248	233 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	REG1A	P05451	166 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	VAMP2	P63027	116 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	C2orf83	Q53S99	150 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	EEF1AKMT3	Q96AZ1	226 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	MGAT4C	Q9UBM8	478 aa		11.81	□□□□□ -0.52
HDLBP-238	ENST00000479894	CCS	O14618	274 aa		11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	SCGB1D2	O95969	90 aa		11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	LGALS1	P09382	135 aa	Known RBP	11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	NPY1R	P25929	384 aa		11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	C15orf32	Q32M92	178 aa		11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	SPINK9	Q5DT21	86 aa		11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	SMIM8	Q96KF7	97 aa		11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	RETN	Q9HD89	108 aa		11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	STRAP	Q9Y3F4	350 aa	Known RBP	11.8	□□□□□ -0.52
HDLBP-238	ENST00000479894	IGHV4OR15-8	A0A075B7B6	117 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894		A0A087WW49	117 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	MPTX1	A8MV57	137 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	TSC22D2	O75157	780 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	OR2J3	O76001	311 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	RRAS2	P62070	204 aa	Predicted RBP	11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	FGL1	Q08830	312 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	BSX	Q3C1V8	233 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	FANCD2OS	Q96PS1	177 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	TXN2	Q99757	166 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	FAM110A	Q9BQ89	295 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	MAGT1	Q9H0U3	335 aa		11.79	□□□□□ -0.52
HDLBP-238	ENST00000479894	NXPH3	O95157	252 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	MBP	P02686	304 aa	Predicted RBP	11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	IFNA4	P05014	189 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	RNASE2	P10153	161 aa	Known RBP	11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	SLC25A4	P12235	298 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	S100A10	P60903	97 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	POLR2G	P62487	172 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	PVRIG	Q6DKI7	326 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	GTSCR1	Q86UQ5	136 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	HAPLN4	Q86UW8	402 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	MISP3	Q96FF7	219 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	RANGRF	Q9HD47	186 aa	Predicted RBP	11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	PSENEN	Q9NZ42	101 aa		11.78	□□□□□ -0.52
HDLBP-238	ENST00000479894	NUPR2	A6NF83	97 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	SSSCA1	O60232	199 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	PRH1	P02810	166 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	HSPB1	P04792	205 aa	Known RBP	11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	ZP3	P21754	424 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	GPX4	P36969	197 aa	Predicted RBP	11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	NPBWR1	P48145	328 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	MFAP4	P55083	255 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	ZNF343	Q6P1L6	599 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	RPP25L	Q8N5L8	163 aa	Known RBP	11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	CACNG8	Q8WXS5	425 aa		11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894	LSM5	Q9Y4Y9	91 aa	Known RBP	11.77	□□□□□ -0.53
HDLBP-238	ENST00000479894		K7EPK0	472 aa		11.76	□□□□□ -0.53
HDLBP-238	ENST00000479894	NDUFB8	O95169	186 aa		11.76	□□□□□ -0.53
HDLBP-238	ENST00000479894	GIP	P09681	153 aa	Predicted RBP	11.76	□□□□□ -0.53
HDLBP-238	ENST00000479894	IAPP	P10997	89 aa		11.76	□□□□□ -0.53
HDLBP-238	ENST00000479894	OPRK1	P41145	380 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms