RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 DMRTA1Q5VZB9 504 aa16.33■□□□□ 0.21
ABCA2-217ENST00000479446 TMEM133Q9H2Q1 129 aa16.33■□□□□ 0.21
ABCA2-217ENST00000479446 CNOT1A5YKK6 2376 aaKnown RBP16.33■□□□□ 0.2
ABCA2-217ENST00000479446 NIT1Q86X76 327 aa16.33■□□□□ 0.2
ABCA2-217ENST00000479446 TMEM242Q9NWH2 141 aa16.33■□□□□ 0.2
ABCA2-217ENST00000479446 SCN8AQ9UQD0 1980 aa16.33■□□□□ 0.2
ABCA2-217ENST00000479446 LAMTOR2Q9Y2Q5 125 aa16.33■□□□□ 0.2
ABCA2-217ENST00000479446 CEACAM1P13688 526 aa16.33■□□□□ 0.2
ABCA2-217ENST00000479446 FABP5P3A8MUU1 101 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 GFRA3O60609 400 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 TEX38Q6PEX7 206 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 PINLYPA6NC86 204 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 MRAP2Q96G30 205 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 VSIRQ9H7M9 311 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 TRBV24-1A0A075B6N3 115 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.32■□□□□ 0.2
ABCA2-217ENST00000479446 PYYP10082 97 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 RNF125Q96EQ8 232 aa16.32■□□□□ 0.2
ABCA2-217ENST00000479446 A0A0G2JMZ2 1700 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 LRRC37A2A6NM11 1700 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 IGKV3OR2-268A0A0C4DH90 116 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 NUTF2P61970 127 aaKnown RBP16.31■□□□□ 0.2
ABCA2-217ENST00000479446 FAM166AQ6J272 317 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 ASCL2Q99929 193 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 SSBP4Q9BWG4 385 aaPredicted RBP16.31■□□□□ 0.2
ABCA2-217ENST00000479446 HAX1O00165 279 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 TFF1P04155 84 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 PSMB11A5LHX3 300 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 PGPEP1LA6NFU8 196 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 DNAL4O96015 105 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 TRAV1-1A0A0B4J248 108 aa16.31■□□□□ 0.2
ABCA2-217ENST00000479446 COLCA2A8K830 154 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 SLC50A1Q9BRV3 221 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 GNB1LQ9BYB4 327 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 FREM3P0C091 2139 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 DMRTA2Q96SC8 542 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 PAX1P15863 534 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 CYB5R2Q6BCY4 276 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 IGHV1-18A0A0C4DH31 117 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 EMP1P54849 157 aa16.3■□□□□ 0.2
ABCA2-217ENST00000479446 RNASE1P07998 156 aaKnown RBP16.29■□□□□ 0.2
ABCA2-217ENST00000479446 GGNQ86UU5 652 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 MTURNQ8N3F0 131 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 IGKV1-27A0A075B6S5 117 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 A0A1B0GW64 132 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 NTN3O00634 580 aaPredicted RBP16.29■□□□□ 0.2
ABCA2-217ENST00000479446 SPRR3Q9UBC9 169 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 SPCS1Q9Y6A9 102 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 SAMD13Q5VXD3 122 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 TREML4Q6UXN2 200 aa16.29■□□□□ 0.2
ABCA2-217ENST00000479446 A0A1B0GWB2 263 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 HIST1H2BLQ99880 126 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 DOCK6Q96HP0 2047 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 TRAV9-2A0A087WT02 112 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 OR10J3Q5JRS4 329 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 ALKBH7Q9BT30 221 aaPredicted RBP16.28■□□□□ 0.2
ABCA2-217ENST00000479446 C17orf82Q86X59 251 aaPredicted RBP16.28■□□□□ 0.2
ABCA2-217ENST00000479446 PSG8Q9UQ74 426 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 TMEM50AO95807 157 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 LEPP41159 167 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 C1QL4Q86Z23 238 aa16.28■□□□□ 0.2
ABCA2-217ENST00000479446 FOXG1P55316 489 aaPredicted RBP16.27■□□□□ 0.2
ABCA2-217ENST00000479446 STAG3L3P0CL85 134 aa16.27■□□□□ 0.2
ABCA2-217ENST00000479446 TMEM101Q96IK0 257 aa16.27■□□□□ 0.2
ABCA2-217ENST00000479446 LINC00614P0C842 121 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 RNASE6Q93091 150 aaKnown RBP16.27■□□□□ 0.19
ABCA2-217ENST00000479446 C2orf88Q9BSF0 95 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 JKAMPQ9P055 326 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 SRRM5B3KS81 715 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 NMSQ5H8A3 153 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 OR13C6PQ8NH95 151 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 FAM168AQ92567 244 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 RNASE4P34096 147 aaKnown RBP16.27■□□□□ 0.19
ABCA2-217ENST00000479446 GGTLC1Q9BX51 225 aa16.27■□□□□ 0.19
ABCA2-217ENST00000479446 FAM71F2Q6NXP2 309 aa16.26■□□□□ 0.19
ABCA2-217ENST00000479446 FOXF2Q12947 444 aa16.26■□□□□ 0.19
ABCA2-217ENST00000479446 TSKUQ8WUA8 353 aa16.26■□□□□ 0.19
ABCA2-217ENST00000479446 RPUSD1Q9UJJ7 312 aaKnown RBP16.26■□□□□ 0.19
ABCA2-217ENST00000479446 HBDP02042 147 aa16.26■□□□□ 0.19
ABCA2-217ENST00000479446 ZNF257Q9Y2Q1 563 aa16.26■□□□□ 0.19
ABCA2-217ENST00000479446 ZNF418Q8TF45 676 aaPredicted RBP16.26■□□□□ 0.19
ABCA2-217ENST00000479446 DUX3Q96PT4 197 aa16.26■□□□□ 0.19
ABCA2-217ENST00000479446 EP300Q09472 2414 aaPredicted RBP16.26■□□□□ 0.19
ABCA2-217ENST00000479446 CXCL1P09341 107 aa16.26■□□□□ 0.19
ABCA2-217ENST00000479446 ZCCHC24Q8N2G6 241 aaKnown RBP16.26■□□□□ 0.19
ABCA2-217ENST00000479446 PPBPP02775 128 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 HIST3H2BBQ8N257 126 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 TNFRSF14Q92956 283 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 C5orf30Q96GV9 206 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 REG4Q9BYZ8 158 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 C7orf69Q9H7B7 122 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 CLPSP04118 112 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 TIMP3P35625 211 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 H3BRM9 83 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 NDUFA3O95167 84 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 PNRC2Q9NPJ4 139 aaKnown RBP16.25■□□□□ 0.19
ABCA2-217ENST00000479446 IGHV1-46P01743 117 aa16.25■□□□□ 0.19
ABCA2-217ENST00000479446 IGHV3-11P01762 117 aa16.24■□□□□ 0.19
ABCA2-217ENST00000479446 KLHDC3Q9BQ90 382 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms