RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TMEM190Q8WZ59 177 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 CIB3Q96Q77 187 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-217ENST00000479161 ZC4H2Q9NQZ6 224 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 MRPL27Q9P0M9 148 aaKnown RBP11.74□□□□□ -0.53
C9orf3-217ENST00000479161 TBC1D24Q9ULP9 559 aa11.74□□□□□ -0.53
C9orf3-217ENST00000479161 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 FAM240BA0A1B0GVZ2 78 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 C15orf62A8K5M9 175 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 IFNA21P01568 189 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 GP9P14770 177 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 ANXA7P20073 488 aaKnown RBP11.73□□□□□ -0.53
C9orf3-217ENST00000479161 DEFB114Q30KQ6 69 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 C4orf46Q504U0 113 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 Q56UQ5 140 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 GGNBP1Q5YKI7 109 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 TMEM116Q8NCL8 245 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 OR10C1Q96KK4 312 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 CHRDL1Q9BU40 450 aa11.73□□□□□ -0.53
C9orf3-217ENST00000479161 DAZ1Q9NQZ3 744 aaKnown RBP11.73□□□□□ -0.53
C9orf3-217ENST00000479161 GNG7O60262 68 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 TMEM50AO95807 157 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 NPY1RP25929 384 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 ID3Q02535 119 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 OXA1LQ15070 435 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 PINX1Q96BK5 328 aaKnown RBP11.72□□□□□ -0.53
C9orf3-217ENST00000479161 RBKSQ9H477 322 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 FNDC4Q9H6D8 234 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-217ENST00000479161 NUDT15Q9NV35 164 aa11.72□□□□□ -0.53
C9orf3-217ENST00000479161 hCG_2014768A0A024R1R8 64 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 TRAV25A0A0B4J276 109 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 ZNF320A2RRD8 509 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 A8MZ25 164 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 CLN5O75503 358 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 HOXB5P09067 269 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 OPRK1P41145 380 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 BCAP31P51572 246 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 TMEM170AQ8WVE7 144 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 CACNG8Q8WXS5 425 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 ZNF414Q96IQ9 312 aa11.71□□□□□ -0.53
C9orf3-217ENST00000479161 IGHV3-21A0A0B4J1V1 117 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 SYNGR2O43760 224 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 IFNA10P01566 189 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 IL5P05113 134 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 H2AFB2P0C5Z0 115 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 GPX4P36969 197 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-217ENST00000479161 RPP30P78346 268 aaKnown RBP11.7□□□□□ -0.54
C9orf3-217ENST00000479161 ZNF600Q6ZNG1 722 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 UBAC2Q8NBM4 344 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 UXS1Q8NBZ7 420 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 ZNF431Q8TF32 576 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-217ENST00000479161 PRR25Q96S07 402 aa11.7□□□□□ -0.54
C9orf3-217ENST00000479161 IFITM3Q01628 133 aa11.69□□□□□ -0.54
C9orf3-217ENST00000479161 CD300EQ496F6 205 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-217ENST00000479161 TM4SF20Q53R12 229 aa11.69□□□□□ -0.54
C9orf3-217ENST00000479161 Q8N1Y9 231 aa11.69□□□□□ -0.54
C9orf3-217ENST00000479161 OR4D5Q8NGN0 318 aa11.69□□□□□ -0.54
C9orf3-217ENST00000479161 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
C9orf3-217ENST00000479161 B9D2Q9BPU9 175 aa11.69□□□□□ -0.54
C9orf3-217ENST00000479161 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
C9orf3-217ENST00000479161 TRAV6A0A075B6T7 132 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 ADAP1O75689 374 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 CD5P06127 495 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 HNRNPCP07910 306 aaKnown RBP eCLIP11.68□□□□□ -0.545e-8■■□□□ 13.5
C9orf3-217ENST00000479161 DEFA1P59665 94 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 DEFA3P59666 94 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 YPEL3P61236 119 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-217ENST00000479161 RAB11AP62491 216 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 CD69Q07108 199 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 PRSS54Q6PEW0 395 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 GINS3Q9BRX5 216 aa11.68□□□□□ -0.54
C9orf3-217ENST00000479161 ZNF785A8K8V0 405 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 IGKV1-17P01599 117 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 NKX2-1P43699 371 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-217ENST00000479161 TAS2R30P59541 319 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 MLANAQ16655 118 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 OR1S2Q8NGQ3 325 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 MLXQ9UH92 298 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 DNAH9Q9NYC9 4486 aa11.67□□□□□ -0.54
C9orf3-217ENST00000479161 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 MPTX1A8MV57 137 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 PRAF2O60831 178 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 NXPH3O95157 252 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 IGHV3-48P01763 117 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 IFNA4P05014 189 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-217ENST00000479161 BMI1P35226 326 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 GTSCR1Q86UQ5 136 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 C12orf45Q8N5I9 185 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-217ENST00000479161 OR52B4Q8NGK2 314 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 SMIM8Q96KF7 97 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 RAB40CQ96S21 281 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms