RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 NECAP1Q8NC96 275 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 OR5AU1Q8NGC0 362 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 OR1L6Q8NGR2 347 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 ZNF502Q8TBZ5 544 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 ZNF355PQ9NSJ1 428 aa10.15□□□□□ -0.78
CHD3-210ENST00000479080 FAM223BA6NKX1 122 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 ADARB2-AS1A8MUL3 147 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 TRBV12-3P01733 135 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 IGHV3-11P01762 117 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
CHD3-210ENST00000479080 OPRK1P41145 380 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 RND2P52198 227 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 OR2F1Q13607 317 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 C15orf32Q32M92 178 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 TEX38Q6PEX7 206 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 TMUB2Q71RG4 321 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 STX12Q86Y82 276 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 FAM223AQ8IWN6 122 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 C11orf44Q8N8P7 122 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 OR10P1Q8NGE3 313 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
CHD3-210ENST00000479080 CORTO00230 105 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 S100A11P31949 105 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 SLC35B1P78383 322 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
CHD3-210ENST00000479080 AWAT1Q58HT5 328 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 TREML4Q6UXN2 200 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 INO80EQ8NBZ0 244 aaPredicted RBP10.13□□□□□ -0.79
CHD3-210ENST00000479080 OR1S2Q8NGQ3 325 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 VN1R17PQ8TDU5 208 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 WFDC12Q8WWY7 111 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 TMEM147Q9BVK8 224 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 GON7Q9BXV9 100 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 SLA2Q9H6Q3 261 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 WDR83OSQ9Y284 106 aa10.13□□□□□ -0.79
CHD3-210ENST00000479080 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
CHD3-210ENST00000479080 UBE2L5PA0A1B0GUS4 154 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 FNDC10F2Z333 226 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 HAX1O00165 279 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 BCL2L11O43521 198 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 ADMP35318 185 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 RPL7L1Q6DKI1 246 aaKnown RBP10.12□□□□□ -0.79
CHD3-210ENST00000479080 ZNF343Q6P1L6 599 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 TMEM182Q6ZP80 229 aaPredicted RBP10.12□□□□□ -0.79
CHD3-210ENST00000479080 COMMD1Q8N668 190 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 THAP8Q8NA92 274 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 TMEM116Q8NCL8 245 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 OR4X1Q8NH49 305 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 CACNG8Q8WXS5 425 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 ACY3Q96HD9 319 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 ATP5SQ99766 215 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
CHD3-210ENST00000479080 GGACTQ9BVM4 153 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 C19orf24Q9BVV8 132 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 C21orf62Q9NYP8 219 aa10.12□□□□□ -0.79
CHD3-210ENST00000479080 A0A0D9SG52 128 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 I3L521 148 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 IGKV1-17P01599 117 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 HNRNPCP07910 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHD3-210ENST00000479080 IGLC1P0CG04 106 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 FCGR2BP31994 310 aaPredicted RBP10.11□□□□□ -0.79
CHD3-210ENST00000479080 ATP5G2Q06055 141 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 ACSM6Q6P461 480 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 LILRB2Q8N423 598 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 USMG5Q96IX5 58 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 OR5B12Q96R08 314 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 MGST2Q99735 147 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 CHRDL1Q9BU40 450 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 ARL6Q9H0F7 186 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 ZC4H2Q9NQZ6 224 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 UQCC1Q9NVA1 299 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 DNHD1Q96M86 4753 aa10.11□□□□□ -0.79
CHD3-210ENST00000479080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.1□□□□□ -0.79
CHD3-210ENST00000479080 RPS10-NUDT3A0A1W2PQS6 291 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 PPP5D1E7EU14 171 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 CLN5O75503 358 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 GPR183P32249 361 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
CHD3-210ENST00000479080 HBG1P69891 147 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 HBG2P69892 147 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 RUNX1Q01196 453 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 OPCMLQ14982 345 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 ATP6V1FQ16864 119 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 TMEM144Q7Z5S9 345 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 OR4X2Q8NGF9 303 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 EEF1AKMT3Q96AZ1 226 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 PPP1R14BQ96C90 147 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 SLC35E1Q96K37 410 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 UBE2E2Q96LR5 201 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 ARPC5LQ9BPX5 153 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 WDR61Q9GZS3 305 aaKnown RBP10.1□□□□□ -0.79
CHD3-210ENST00000479080 ARV1Q9H2C2 271 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 THYN1Q9P016 225 aa10.1□□□□□ -0.79
CHD3-210ENST00000479080 A0A1B0GUS0 222 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 SMCO3A2RU48 225 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 OR2T8A6NH00 312 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms