RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SSBP3Q9BWW4 388 aaPredicted RBP8.74□□□□□ -1.01
VPS52-217ENST00000478934 COMMD5Q9GZQ3 224 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 SERTAD4Q9NUC0 356 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 NAGKQ9UJ70 344 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 V9GYV3 84 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 MALRD1Q5VYJ5 2156 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 E7EQL1 145 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 CRISP2P16562 243 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 IQCJQ1A5X6 159 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 BAGE3Q86Y29 109 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 BAGE2Q86Y30 109 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 NDUFA4L2Q9NRX3 87 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 TMEM106BQ9NUM4 274 aa8.74□□□□□ -1.01
VPS52-217ENST00000478934 TRAV34A0A0B4J273 112 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 ENSAO43768 121 aaKnown RBP8.73□□□□□ -1.01
VPS52-217ENST00000478934 SLC25A17O43808 307 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 CNTFRP26992 372 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 RPL8P62917 257 aaKnown RBP8.73□□□□□ -1.01
VPS52-217ENST00000478934 DNLZQ5SXM8 178 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 FLYWCH2Q96CP2 140 aaKnown RBP8.73□□□□□ -1.01
VPS52-217ENST00000478934 HSPB9Q9BQS6 159 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 GAL3ST2Q9H3Q3 398 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 ZNF430Q9H8G1 570 aaPredicted RBP8.73□□□□□ -1.01
VPS52-217ENST00000478934 RAB9BQ9NP90 201 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 BET1LQ9NYM9 111 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 ZNF257Q9Y2Q1 563 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 LOXP28300 417 aaPredicted RBP8.73□□□□□ -1.01
VPS52-217ENST00000478934 CD69Q07108 199 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 RPEL1Q2QD12 228 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 C2orf83Q53S99 150 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 HCP5Q6MZN7 132 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 OR5AN1Q8NGI8 311 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 VN1R17PQ8TDU5 208 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 FAM168AQ92567 244 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 NPIPB3Q92617 1050 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 RNASE6Q93091 150 aaKnown RBP8.73□□□□□ -1.01
VPS52-217ENST00000478934 SNHG12Q9BXW3 62 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 PAM16Q9Y3D7 125 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 ARHGAP32A7KAX9 2087 aa8.73□□□□□ -1.01
VPS52-217ENST00000478934 HRNRQ86YZ3 2850 aaPredicted RBP8.73□□□□□ -1.01
VPS52-217ENST00000478934 IGLV2-23P01705 113 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 FAM87AP0C7U9 286 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 TAS2R60P59551 318 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 YPEL3P61236 119 aaPredicted RBP8.72□□□□□ -1.01
VPS52-217ENST00000478934 NOL4LQ96MY1 436 aaPredicted RBP8.72□□□□□ -1.01
VPS52-217ENST00000478934 RCHY1Q96PM5 261 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 NAT8BQ9UHF3 227 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 SHISA9B4DS77 424 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 TNFRSF13BO14836 293 aaPredicted RBP8.72□□□□□ -1.01
VPS52-217ENST00000478934 NDUFB3O43676 98 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 MT-CO2P00403 227 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 APOA2P02652 100 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 G0S2P27469 103 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 GRNP28799 593 aaKnown RBP8.72□□□□□ -1.01
VPS52-217ENST00000478934 FOXC1Q12948 553 aa8.72□□□□□ -1.01
VPS52-217ENST00000478934 H3BTX0 84 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 PRR27Q6MZM9 219 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 PATE2Q6UY27 113 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 ZNF705AQ6ZN79 300 aaPredicted RBP8.71□□□□□ -1.01
VPS52-217ENST00000478934 C11orf42Q8N5U0 333 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 OR5B3Q8NH48 314 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 LINC01560Q8TB33 94 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 FAM167A-AS1Q96KT0 104 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 SAMD10Q9BYL1 202 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 GSX1Q9H4S2 264 aaPredicted RBP8.71□□□□□ -1.01
VPS52-217ENST00000478934 GNB4Q9HAV0 340 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 DYNLRB1Q9NP97 96 aa8.71□□□□□ -1.01
VPS52-217ENST00000478934 RALYQ9UKM9 306 aaKnown RBP8.71□□□□□ -1.01
VPS52-217ENST00000478934 LY6HO94772 140 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 AREGP15514 252 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 MRGPRG-AS1Q2M3A8 158 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 OR1L8Q8NGR8 309 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 OSR1Q8TAX0 266 aaPredicted RBP8.71□□□□□ -1.02
VPS52-217ENST00000478934 ST6GALNAC6Q969X2 333 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 C11orf52Q96A22 123 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 SLC25A33Q9BSK2 321 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 TECRQ9NZ01 308 aaKnown RBP8.71□□□□□ -1.02
VPS52-217ENST00000478934 RPH3ALQ9UNE2 315 aa8.71□□□□□ -1.02
VPS52-217ENST00000478934 ANKHD1Q8IWZ3 2542 aaKnown RBP8.7□□□□□ -1.02
VPS52-217ENST00000478934 MOSP00540 346 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 DLX6P56179 175 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 GNG5P63218 68 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 UBE2L3P68036 154 aaKnown RBP8.7□□□□□ -1.02
VPS52-217ENST00000478934 MEF2CQ06413 473 aaPredicted RBP8.7□□□□□ -1.02
VPS52-217ENST00000478934 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 LRRC10Q5BKY1 277 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 SPACA3Q8IXA5 215 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 OR5AU1Q8NGC0 362 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 SLC35E1Q96K37 410 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 TXNDC17Q9BRA2 123 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 JKAMPQ9P055 326 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 MED13LQ71F56 2210 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 IGKV1D-37A0A075B6S9 117 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 A0A1W2PPI3 338 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 PSMB11A5LHX3 300 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 IGLV2-8P01709 118 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 OR5G3P0C626 314 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 PMCHP20382 165 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 267.5 ms