RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 HIST3H2BBQ8N257 126 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 C10orf126Q8N4M7 172 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 TMEM70Q9BUB7 260 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 IMUPQ9GZP8 106 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 ACER3Q9NUN7 267 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 SS18L2Q9UHA2 77 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 AMMECR1Q9Y4X0 333 aaPredicted RBP1.39□□□□□ -2.19
VLDLR-204ENST00000478776 YTHDC2Q9H6S0 1430 aaKnown RBP1.39□□□□□ -2.19
VLDLR-204ENST00000478776 MALRD1Q5VYJ5 2156 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 ECM29Q5VYK3 1845 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 SCAF11Q99590 1463 aaKnown RBP1.38□□□□□ -2.19
VLDLR-204ENST00000478776 COL4A2P08572 1712 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 MYH11P35749 1972 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 CPAMD8Q8IZJ3 1885 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 TMSB15BA0A087X1C1 80 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 OR51F1A6NGY5 319 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 RFPL4AA6NLU0 287 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 RFPL4AL1F8VTS6 287 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 H0YJX3 145 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 C3orf84H3BNL1 204 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 H7C1C5 153 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 MFSD11O43934 449 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 DEFA4P12838 97 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 IDO1P14902 403 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 SRIP30626 198 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 EIF2B2P49770 351 aaKnown RBP1.38□□□□□ -2.19
VLDLR-204ENST00000478776 TMEM258P61165 79 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 LCN6P62502 163 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 GNG5P63218 68 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 TFAMQ00059 246 aaKnown RBP1.38□□□□□ -2.19
VLDLR-204ENST00000478776 NDUFA5Q16718 116 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 ZNF791Q3KP31 576 aaPredicted RBP1.38□□□□□ -2.19
VLDLR-204ENST00000478776 SCGB2B2Q4G0G5 96 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 Q6ZTI0 123 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 KTN1-AS1Q86SY8 53 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 BPIFA4PQ86YQ2 179 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 CLVS1Q8IUQ0 354 aaPredicted RBP1.38□□□□□ -2.19
VLDLR-204ENST00000478776 STX19Q8N4C7 294 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 SIGLECL1Q8N7X8 197 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 OR4X2Q8NGF9 303 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 DNAJC9Q8WXX5 260 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 TMEM106AQ96A25 262 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 DOHHQ9BU89 302 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 DDA1Q9BW61 102 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 PBOV1Q9GZY1 135 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 TMEM133Q9H2Q1 129 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 MED29Q9NX70 200 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 SSR3Q9UNL2 185 aa1.38□□□□□ -2.19
VLDLR-204ENST00000478776 FBN3Q75N90 2809 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 A0A087X0T9 212 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 TRGV4A0A0C4DH28 118 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 A0A0D9SEW6 157 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 ARRDC5A6NEK1 342 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 HMSDA8MTL9 139 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 GPR31O00270 319 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 CYB5BO43169 146 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 TCL1BO95988 128 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 CLPSP04118 112 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 IGKV1-16P04430 117 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 METTL15P1P0C7V9 234 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 RELAQ04206 551 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 RHEBQ15382 184 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 RRN3P1Q2M238 152 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 ZNF181Q2M3W8 571 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 TMEM86AQ8N2M4 240 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 OR52R1Q8NGF1 315 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 MALSU1Q96EH3 234 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 LYSMD1Q96S90 227 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 GPER1Q99527 375 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 SERPINI1Q99574 410 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 GINS4Q9BRT9 223 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 PBDC1Q9BVG4 233 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 MIXL1Q9H2W2 232 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 MRPL40Q9NQ50 206 aaKnown RBP1.37□□□□□ -2.19
VLDLR-204ENST00000478776 OSTCQ9NRP0 149 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 CKLFQ9UBR5 152 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 SLC35A3Q9Y2D2 325 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 RIC1Q4ADV7 1423 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 MED1Q15648 1581 aaPredicted RBP1.37□□□□□ -2.19
VLDLR-204ENST00000478776 SMARCA4P51532 1647 aa1.37□□□□□ -2.19
VLDLR-204ENST00000478776 ZCCHC11Q5TAX3 1644 aaKnown RBP1.37□□□□□ -2.19
VLDLR-204ENST00000478776 UBR2Q8IWV8 1755 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 MYH2Q9UKX2 1941 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 IGLV3-9A0A075B6K5 115 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 IGKV1-9A0A0C4DH69 117 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 A0A0D9SG52 128 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 A0A0G2JQZ4 141 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 A0A1B0GVG6 124 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 MEIS3P1A6NDR6 274 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 ZNF860A6NHJ4 632 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 TMEM212A6NML5 194 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 NAPSAO96009 420 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 IFNA21P01568 189 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 COX6A1P12074 109 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 PEBP1P30086 187 aaKnown RBP1.36□□□□□ -2.19
VLDLR-204ENST00000478776 TPRXLQ17RH7 258 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 UHRF1BP1Q6BDS2 1440 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 DEFB128Q7Z7B8 93 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 AKAP14Q86UN6 197 aa1.36□□□□□ -2.19
VLDLR-204ENST00000478776 EXOC3-AS1Q8N2X6 119 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms