RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CMBLQ96DG6 245 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLAMF6Q96DU3 332 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 RNF170Q96K19 258 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2V2Q96R30 315 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8B2Q96RD0 313 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 HSD17B10Q99714 261 aaKnown RBP2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 NIPSNAP1Q9BPW8 284 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 AGMATQ9BSE5 352 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 MARVELD1Q9BSK0 173 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 SUCNR1Q9BXA5 334 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 RERGLQ9H628 205 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 KAAG1Q9UBP8 84 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR5V1Q9UGF6 321 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 MPC1Q9Y5U8 109 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 PLXNB1O43157 2135 aa2.39□□□□□ -2.03
CDC42BPA-212ENST00000478573 STAB1Q9NY15 2570 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRAV38-1A0A0B4J264 116 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGHV1-69DA0A0B4J2H0 117 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 C7orf66A4D0T2 115 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 GGT3PA6NGU5 568 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 TVP23AA6NH52 213 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 CD300LBA8K4G0 201 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 F5H5K5 113 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 LYNX1G3V0Z9 82 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 H3BN98 237 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 NDUFA2O43678 99 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 ENSAO43768 121 aaKnown RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 ORC5O43913 435 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 NOS1APO75052 506 aaPredicted RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC22A5O76082 557 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 CRYZL1O95825 349 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 APCSP02743 223 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 GYPBP06028 91 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 CRYGCP07315 174 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 LYNX1P0DP58 116 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 CD37P11049 281 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 HTR1DP28221 377 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 SDC2P34741 201 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 CFHR2P36980 270 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 VBP1P61758 197 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 NCS1P62166 190 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 FAM3AP98173 230 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 TPBGQ13641 420 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF266Q14584 549 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8G1Q15617 311 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 KLHL12Q53G59 568 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 SMUG1Q53HV7 270 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 C5orf47Q569G3 176 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 GLYATL3Q5SZD4 288 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 C12orf73Q69YU5 71 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2T2Q6IF00 324 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 LRRN1Q6UXK5 716 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC16A13Q7RTY0 426 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 LRRC28Q86X40 367 aaPredicted RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR5AS1Q8N127 324 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 EIF4E3Q8N5X7 224 aaKnown RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 DEFB108BQ8NET1 73 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2Z1Q8NG97 314 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8B12Q8NGG6 310 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR6K6Q8NGW6 343 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 NDNFQ8TB73 568 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 ENKURQ8TC29 256 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 HAVCR2Q8TDQ0 301 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 ASB17Q8WXJ9 295 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC25A46Q96AG3 418 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 FLYWCH2Q96CP2 140 aaKnown RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZMYND19Q96E35 227 aaPredicted RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 REEP6Q96HR9 211 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 TEAD3Q99594 435 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 MGLLQ99685 303 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 UQCC2Q9BRT2 126 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 RTL8AQ9BWD3 113 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 MND1Q9BWT6 205 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 SRRQ9GZT4 340 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCDC90BQ9GZT6 254 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 TOLLIPQ9H0E2 274 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 TLNRD1Q9H1K6 362 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM100Q9NV29 134 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 RBFOX1Q9NWB1 397 aaKnown RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 NDUFB11Q9NX14 153 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 OPN4Q9UHM6 478 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 SSR3Q9UNL2 185 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 LSM2Q9Y333 95 aaKnown RBP2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 INSIG2Q9Y5U4 225 aa2.38□□□□□ -2.03
CDC42BPA-212ENST00000478573 FBN1P35555 2871 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGLV4-60A0A075B6I1 120 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRAV40A0A0B4J280 105 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRDV1A0A1B0GX56 115 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 FAM183AA6NL82 134 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 KRBOX1C9JBD0 128 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 F5H5P2 479 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 CLDN34H7C241 214 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF593O00488 134 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 RBFOX2O43251 390 aaKnown RBP eCLIP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 MPDU1O75352 247 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 SC5DO75845 299 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 DHRS3O75911 302 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 FADS2O95864 444 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 DHFRP00374 187 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 CST4P01036 141 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms