RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 A0A1B0GW64 132 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 GCGP01275 180 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 RPLP1P05386 114 aaKnown RBP8.02□□□□□ -1.13
CMC1-209ENST00000477739 TNXAQ16473 311 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 UNQ5815/PRO19632Q6UWF5 114 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 DEFB104AQ8WTQ1 72 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 TMEM106BQ9NUM4 274 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 RNF114Q9Y508 228 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 CCDC168Q8NDH2 2452 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 CNIH1O95406 144 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 IGHV3-23P01764 117 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 PTTG1IPP53801 180 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 WDR31Q8NA23 367 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 HES4Q9HCC6 221 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 FBXL7Q9UJT9 491 aa8.02□□□□□ -1.13
CMC1-209ENST00000477739 TNRC6BQ9UPQ9 1833 aaKnown RBP8.02□□□□□ -1.13
CMC1-209ENST00000477739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 RTL8BQ17RB0 113 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 RNF2Q99496 336 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 MRPL20Q9BYC9 149 aaKnown RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 NRN1Q9NPD7 142 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 MBNL3Q9NUK0 354 aaKnown RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 TNRC6AQ8NDV7 1962 aaKnown RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 J3KRW8 73 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 SRP14P37108 136 aaKnown RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 NUTF2P61970 127 aaKnown RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 ZNF841Q6ZN19 808 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 FAM90A1Q86YD7 464 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 KDF1Q8NAX2 398 aaPredicted RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 TMEM116Q8NCL8 245 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 OR8B2Q96RD0 313 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 MRPL37Q9BZE1 423 aaKnown RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 hADV38S2A0JD32 116 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 PGPA6NDG6 321 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 SRRM4A7MD48 611 aaKnown RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 ZNF891A8MT65 544 aaPredicted RBP8.01□□□□□ -1.13
CMC1-209ENST00000477739 APCSP02743 223 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 CCKARP32238 428 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 UQCRFS1P47985 274 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 C11orf53Q8IXP5 236 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 ZBTB34Q8NCN2 500 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 OR1L4Q8NGR5 311 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 KCNIP2Q9NS61 270 aa8.01□□□□□ -1.13
CMC1-209ENST00000477739 MGST3O14880 152 aa8□□□□□ -1.13
CMC1-209ENST00000477739 IGKV3-15P01624 115 aa8□□□□□ -1.13
CMC1-209ENST00000477739 IGHG3P01860 377 aa8□□□□□ -1.13
CMC1-209ENST00000477739 SAA1P0DJI8 122 aaPredicted RBP8□□□□□ -1.13
CMC1-209ENST00000477739 HSPE1P61604 102 aaKnown RBP8□□□□□ -1.13
CMC1-209ENST00000477739 FOXC1Q12948 553 aa8□□□□□ -1.13
CMC1-209ENST00000477739 NOL4LQ96MY1 436 aaPredicted RBP8□□□□□ -1.13
CMC1-209ENST00000477739 KMT2EQ8IZD2 1858 aa8□□□□□ -1.13
CMC1-209ENST00000477739 DSCAMO60469 2012 aa8□□□□□ -1.13
CMC1-209ENST00000477739 CORO2AQ92828 525 aa8□□□□□ -1.13
CMC1-209ENST00000477739 DNAJC4Q9NNZ3 241 aa8□□□□□ -1.13
CMC1-209ENST00000477739 NPIPB11E5RHQ5 1161 aa8□□□□□ -1.13
CMC1-209ENST00000477739 BRS3P32247 399 aa8□□□□□ -1.13
CMC1-209ENST00000477739 ERHP84090 104 aaKnown RBP8□□□□□ -1.13
CMC1-209ENST00000477739 RPL19P84098 196 aaKnown RBP8□□□□□ -1.13
CMC1-209ENST00000477739 TM4SF20Q53R12 229 aa8□□□□□ -1.13
CMC1-209ENST00000477739 PRNTQ86SH4 94 aa8□□□□□ -1.13
CMC1-209ENST00000477739 TMEM208Q9BTX3 173 aa8□□□□□ -1.13
CMC1-209ENST00000477739 TPSG1Q9NRR2 321 aa8□□□□□ -1.13
CMC1-209ENST00000477739 IL19Q9UHD0 177 aa8□□□□□ -1.13
CMC1-209ENST00000477739 SLC45A2Q9UMX9 530 aa8□□□□□ -1.13
CMC1-209ENST00000477739 AMMECR1Q9Y4X0 333 aaPredicted RBP8□□□□□ -1.13
CMC1-209ENST00000477739 ADH4P08319 380 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 RAB7AP51149 207 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 C22orf34Q6ZV56 151 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 FAM90A26D6RGX4 464 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 FAM222BQ8WU58 562 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 IL36BQ9NZH7 164 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 WASHC3Q9Y3C0 194 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 HILPDAQ9Y5L2 63 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 FBLL1A6NHQ2 334 aaKnown RBP7.99□□□□□ -1.13
CMC1-209ENST00000477739 E7EUB6 86 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 ISLRO14498 428 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 CHEK1O14757 476 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 STAG3L2P0CL84 134 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 STAG3L3P0CL85 134 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 TNFSF4P23510 183 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 KLF17Q5JT82 389 aaPredicted RBP7.99□□□□□ -1.13
CMC1-209ENST00000477739 NEUROG1Q92886 237 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 PAXXQ9BUH6 204 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 IFI27L2Q9H2X8 130 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 ASCL3Q9NQ33 180 aa7.99□□□□□ -1.13
CMC1-209ENST00000477739 USP9XQ93008 2570 aaPredicted RBP7.98□□□□□ -1.13
CMC1-209ENST00000477739 IGHV3-49A0A0A0MS15 119 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 GGTLC3B5MD39 225 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 K7EM74 188 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 GGCTO75223 188 aaKnown RBP7.98□□□□□ -1.13
CMC1-209ENST00000477739 C1orf162Q8NEQ5 155 aaPredicted RBP7.98□□□□□ -1.13
CMC1-209ENST00000477739 SLC25A10Q9UBX3 287 aaPredicted RBP7.98□□□□□ -1.13
CMC1-209ENST00000477739 IGKV3-7A0A075B6H7 116 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 CGB1A6NKQ9 187 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 PMS2P5A8MQ11 134 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 PCP4P48539 62 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 TAS2R45P59539 299 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 C10orf113Q5VZT2 155 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 IGFL4Q6B9Z1 124 aa7.98□□□□□ -1.13
CMC1-209ENST00000477739 OR52E5Q8NH55 327 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms