RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GNB4Q9HAV0 340 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 C21orf62Q9NYP8 219 aa12.55□□□□□ -0.4
VHL-203ENST00000477538 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
VHL-203ENST00000477538 NUP62P37198 522 aaPredicted RBP12.54□□□□□ -0.4
VHL-203ENST00000477538 SLC38A11Q08AI6 406 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 ARL16Q0P5N6 197 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 ACSM6Q6P461 480 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 ACOT7LQ6ZUV0 252 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 ZNF502Q8TBZ5 544 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 CCDC140Q96MF4 163 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 OR5B12Q96R08 314 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 CITED1Q99966 193 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 ZC4H2Q9NQZ6 224 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 STAB1Q9NY15 2570 aa12.54□□□□□ -0.4
VHL-203ENST00000477538 TRBV7-1A0A0A6YYK4 115 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 NUDT19A8MXV4 375 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
VHL-203ENST00000477538 MFAP4P55083 255 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 HBG1P69891 147 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 HBG2P69892 147 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 DLK1P80370 383 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 NHLH2Q02577 135 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 BAXQ07812 192 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 ZNF343Q6P1L6 599 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 C18orf65Q6ZTR6 163 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 C3orf56Q8N813 242 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 KLHL30-AS1Q8NEE0 82 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 OR11H4Q8NGC9 324 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 C4orf3Q8WVX3 66 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 CACNG8Q8WXS5 425 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 SLC35E1Q96K37 410 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 ZNF747Q9BV97 191 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 MRPL36Q9P0J6 103 aaKnown RBP12.53□□□□□ -0.4
VHL-203ENST00000477538 TNFSF18Q9UNG2 199 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
VHL-203ENST00000477538 ARPC5O15511 151 aa12.52□□□□□ -0.41
VHL-203ENST00000477538 C1QBP02746 253 aa12.52□□□□□ -0.41
VHL-203ENST00000477538 Q56UQ5 140 aa12.52□□□□□ -0.41
VHL-203ENST00000477538 NDUFA11Q86Y39 141 aa12.52□□□□□ -0.41
VHL-203ENST00000477538 LILRB2Q8N423 598 aa12.52□□□□□ -0.41
VHL-203ENST00000477538 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
VHL-203ENST00000477538 INO80EQ8NBZ0 244 aaPredicted RBP12.52□□□□□ -0.41
VHL-203ENST00000477538 AQP10Q96PS8 301 aa12.52□□□□□ -0.41
VHL-203ENST00000477538 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.51□□□□□ -0.41
VHL-203ENST00000477538 ANKRD34BA5PLL1 514 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 ADARB2-AS1A8MUL3 147 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 PFDN1O60925 122 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 S100A11P31949 105 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 FCGR2BP31994 310 aaPredicted RBP12.51□□□□□ -0.41
VHL-203ENST00000477538 NPBWR1P48145 328 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 RND2P52198 227 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 GAMTQ14353 236 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 NSUN5P1Q3KNT7 163 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 FAM209BQ5JX69 171 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 CLEC19AQ6UXS0 136 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 OR1S2Q8NGQ3 325 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 OR5C1Q8NGR4 320 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 OR4X1Q8NH49 305 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
VHL-203ENST00000477538 ACY3Q96HD9 319 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 MDFIQ99750 246 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 TXN2Q99757 166 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 GGACTQ9BVM4 153 aa12.51□□□□□ -0.41
VHL-203ENST00000477538 SMCO3A2RU48 225 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 OR2T8A6NH00 312 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 HMSDA8MTL9 139 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 FNDC10F2Z333 226 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 F8W735 103 aaPredicted RBP12.5□□□□□ -0.41
VHL-203ENST00000477538 I3L521 148 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 GNG7O60262 68 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 GPR183P32249 361 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 RUNX1Q01196 453 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 AKR1C1Q04828 323 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 C8orf86Q6ZUL3 223 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 TMEM116Q8NCL8 245 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 NPIPB3Q92617 1050 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 ATP6V0BQ99437 205 aa12.5□□□□□ -0.41
VHL-203ENST00000477538 GAR1Q9NY12 217 aaKnown RBP12.5□□□□□ -0.41
VHL-203ENST00000477538 PEF1Q9UBV8 284 aaKnown RBP12.5□□□□□ -0.41
VHL-203ENST00000477538 CLN5O75503 358 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 TRBV12-3P01733 135 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 CLEC3BP05452 202 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 ARL3P36405 182 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 AP2S1P53680 142 aaPredicted RBP12.49□□□□□ -0.41
VHL-203ENST00000477538 CLINT1Q14677 625 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 ATP6V1FQ16864 119 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 ZFP69Q49AA0 526 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 TMEM147Q9BVK8 224 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 MFFQ9GZY8 342 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 UQCC1Q9NVA1 299 aa12.49□□□□□ -0.41
VHL-203ENST00000477538 PPP5D1E7EU14 171 aa12.48□□□□□ -0.41
VHL-203ENST00000477538 TGOLN2O43493 480 aa12.48□□□□□ -0.41
VHL-203ENST00000477538 SPSB3Q6PJ21 355 aa12.48□□□□□ -0.41
VHL-203ENST00000477538 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms