RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 C15orf65H3BRN8 121 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 RAB9AP51151 201 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 HBBP68871 147 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 C10orf55Q5SWW7 151 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 Q8TCH9 128 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 FMC1Q96HJ9 113 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 FNDC10F2Z333 226 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 ZMAT5Q9UDW3 170 aaKnown RBP11.99□□□□□ -0.49
HDAC6-220ENST00000477528 RAXQ9Y2V3 346 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 UFC1Q9Y3C8 167 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 TTC28Q96AY4 2481 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 MYOD1P15172 320 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 PMCHL1Q16048 86 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 IGFL2Q6UWQ7 119 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 RNASE7Q9H1E1 156 aaKnown RBP11.99□□□□□ -0.49
HDAC6-220ENST00000477528 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 PYYP10082 97 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 PRB3Q04118 309 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-220ENST00000477528 FOXL1Q12952 345 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 HIST3H2BBQ8N257 126 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 GPR82Q96P67 336 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
HDAC6-220ENST00000477528 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 C9JCJ5 164 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 IGLV3-9A0A075B6K5 115 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 OR2T8A6NH00 312 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 PRSS8Q16651 343 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 FAM71F2Q6NXP2 309 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 DERL1Q9BUN8 251 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 Q9H3A6 140 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 FAM215AQ9Y5M1 114 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 PKDREJQ9NTG1 2253 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 LRP4O75096 1905 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 RPS20P60866 119 aaKnown RBP11.98□□□□□ -0.49
HDAC6-220ENST00000477528 ZNF672Q499Z4 452 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-220ENST00000477528 HAPLN4Q86UW8 402 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 C11orf53Q8IXP5 236 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 C21orf62Q9NYP8 219 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 OR2J3O76001 311 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 WNT2P09544 360 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 PDLIM4P50479 330 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 ZNF726P1Q15940 193 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
HDAC6-220ENST00000477528 ADAMTS9Q9P2N4 1935 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 EPDR1Q9UM22 224 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 LINC00587B1AMM8 73 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 TCAPO15273 167 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 TWIST1Q15672 202 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 REC114Q7Z4M0 266 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 HIST1H2BLQ99880 126 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 ATG101Q9BSB4 218 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 RPP21Q9H633 154 aaKnown RBP11.97□□□□□ -0.49
HDAC6-220ENST00000477528 CADP27708 2225 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 RPLP1P05386 114 aaKnown RBP11.97□□□□□ -0.49
HDAC6-220ENST00000477528 AREGP15514 252 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 ADMP35318 185 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 C17orf58Q2M2W7 97 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 SPATA45Q537H7 98 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 LBHQ53QV2 105 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-220ENST00000477528 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
HDAC6-220ENST00000477528 SOX21Q9Y651 276 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-220ENST00000477528 NUP210LQ5VU65 1888 aa11.96□□□□□ -0.49
HDAC6-220ENST00000477528 LEPROTL1O95214 131 aa11.96□□□□□ -0.49
HDAC6-220ENST00000477528 LOXL3P58215 753 aa11.96□□□□□ -0.49
HDAC6-220ENST00000477528 SAPCD1Q5SSQ6 148 aa11.96□□□□□ -0.49
HDAC6-220ENST00000477528 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
HDAC6-220ENST00000477528 TIMM23O14925 209 aa11.96□□□□□ -0.49
HDAC6-220ENST00000477528 WT1P19544 449 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-220ENST00000477528 VDAC2P45880 294 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-220ENST00000477528 HLA-DRB1P01911 266 aa11.96□□□□□ -0.5
HDAC6-220ENST00000477528 PRSS1P07477 247 aa11.96□□□□□ -0.5
HDAC6-220ENST00000477528 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.5
HDAC6-220ENST00000477528 GFI1BQ5VTD9 330 aa11.96□□□□□ -0.5
HDAC6-220ENST00000477528 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.5
HDAC6-220ENST00000477528 LY96Q9Y6Y9 160 aa11.96□□□□□ -0.5
HDAC6-220ENST00000477528 S4R3C0 116 aa11.96□□□□□ -0.5
HDAC6-220ENST00000477528 DNAH12Q6ZR08 3092 aa11.96□□□□□ -0.5
HDAC6-220ENST00000477528 THBDP07204 575 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 FCER1GP30273 86 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 EEF1AKMT3Q96AZ1 226 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 FBXL7Q9UJT9 491 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 GNG5P63218 68 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 IGHV1-3A0A0C4DH29 117 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 SOD3P08294 240 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 RELQ04864 619 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-220ENST00000477528 CRIP3Q6Q6R5 217 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 OR8A1Q8NGG7 326 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 C16orf92Q96LL3 132 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 ATP5G2Q06055 141 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 RNF5Q99942 180 aa11.95□□□□□ -0.5
HDAC6-220ENST00000477528 IGKV3-7A0A075B6H7 116 aa11.94□□□□□ -0.5
HDAC6-220ENST00000477528 DOCK10Q96BY6 2186 aa11.94□□□□□ -0.5
HDAC6-220ENST00000477528 DLX6P56179 175 aa11.94□□□□□ -0.5
HDAC6-220ENST00000477528 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms