RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZNF600Q6ZNG1 722 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 SELENOHQ8IZQ5 122 aaKnown RBP7.99□□□□□ -1.13
SEC13-214ENST00000476597 KIR2DL5AQ8N109 375 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 LILRB2Q8N423 598 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 KIR2DL5BQ8NHK3 375 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 LHFPL5Q8TAF8 219 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 RBPMSQ93062 196 aaKnown RBP7.99□□□□□ -1.13
SEC13-214ENST00000476597 GPR146Q96CH1 333 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 GALNT14Q96FL9 552 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 SOSTQ9BQB4 213 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 FNDC4Q9H6D8 234 aaPredicted RBP7.99□□□□□ -1.13
SEC13-214ENST00000476597 VSIRQ9H7M9 311 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 ENY2Q9NPA8 101 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.99□□□□□ -1.13
SEC13-214ENST00000476597 ALMS1Q8TCU4 4167 aa7.99□□□□□ -1.13
SEC13-214ENST00000476597 IGHV3OR16-13A0A075B7E8 117 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 IGHV3-74A0A0B4J1X5 117 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 A0A1B0GU03 582 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 ANKRD20A5PA0PJZ0 165 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 CRYM-AS1A6NIL9 109 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 CORTO00230 105 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 CLN5O75503 358 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 APOHP02749 345 aaPredicted RBP7.98□□□□□ -1.13
SEC13-214ENST00000476597 CD5P06127 495 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 BMI1P35226 326 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 HOXA1P49639 335 aaPredicted RBP7.98□□□□□ -1.13
SEC13-214ENST00000476597 APRG1Q8IVJ8 170 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 STPG3Q8N7X2 389 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 OR51S1Q8NGJ8 323 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 OR4X1Q8NH49 305 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 RNASE11Q8TAA1 199 aaKnown RBP7.98□□□□□ -1.13
SEC13-214ENST00000476597 RNF183Q96D59 192 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 PRRT1Q99946 306 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 GINS3Q9BRX5 216 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 SLIRPQ9GZT3 109 aaKnown RBP7.98□□□□□ -1.13
SEC13-214ENST00000476597 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 MAP6D1Q9H9H5 199 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 MRPL36Q9P0J6 103 aaKnown RBP7.98□□□□□ -1.13
SEC13-214ENST00000476597 RSL24D1Q9UHA3 163 aaKnown RBP7.98□□□□□ -1.13
SEC13-214ENST00000476597 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
SEC13-214ENST00000476597 TMEM56-RWDD3S4R434 201 aa7.98□□□□□ -1.13
SEC13-214ENST00000476597 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 IGKV3-7A0A075B6H7 116 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 RPL35AP18077 110 aaKnown RBP7.97□□□□□ -1.13
SEC13-214ENST00000476597 TNFSF8P32971 234 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 TFPI2P48307 235 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 PAFAH1B2P68402 229 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 TNFRSF9Q07011 255 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 TMEM268Q5VZI3 342 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 TCF24Q7RTU0 167 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 GBGT1Q8N5D6 347 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 ST8SIA2Q92186 375 aa7.97□□□□□ -1.13
SEC13-214ENST00000476597 C6orf62Q9GZU0 229 aaPredicted RBP7.97□□□□□ -1.13
SEC13-214ENST00000476597 TRAV30A0A087WSZ9 112 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 FABP12A6NFH5 140 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 H3BMQ9 156 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 DFFBO76075 338 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 OPRK1P41145 380 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 HTR2BP41595 481 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 TMEM187Q14656 261 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 ZNF124Q15973 351 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 DEFB135Q30KP9 77 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 C2orf83Q53S99 150 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 LYG2Q86SG7 212 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 IL22RA2Q969J5 263 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 TMEM230Q96A57 120 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 SCGB3A2Q96PL1 93 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 CSTL1Q9H114 145 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 MS4A6AQ9H2W1 248 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 HEYLQ9NQ87 328 aaPredicted RBP7.96□□□□□ -1.14
SEC13-214ENST00000476597 CACNG5Q9UF02 275 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 SCP2D1Q9UJQ7 156 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 KCNIP3Q9Y2W7 256 aa7.96□□□□□ -1.14
SEC13-214ENST00000476597 TRAV2A0A0B4J234 112 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 IGHV3-66A0A0C4DH42 116 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 A0A0J9YWU9 116 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 A0A1W2PS18 150 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 JTBO76095 146 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 IGKV1-17P01599 117 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 NPPCP23582 126 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 CRYBB3P26998 211 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 EWSR1Q01844 656 aaKnown RBP eCLIP7.95□□□□□ -1.14
SEC13-214ENST00000476597 PRSS54Q6PEW0 395 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 CACFD1Q9UGQ2 172 aa7.95□□□□□ -1.14
SEC13-214ENST00000476597 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 CEBPZOSA8MTT3 80 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 MPTX1A8MV57 137 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 DNASE2O00115 360 aaPredicted RBP7.94□□□□□ -1.14
SEC13-214ENST00000476597 NOL3O60936 208 aaKnown RBP7.94□□□□□ -1.14
SEC13-214ENST00000476597 SCGB2A1O75556 95 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 SULT1A3P0DMM9 295 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 SULT1A4P0DMN0 295 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 ATF4P18848 351 aaPredicted RBP7.94□□□□□ -1.14
SEC13-214ENST00000476597 SUPT4H1P63272 117 aaKnown RBP7.94□□□□□ -1.14
SEC13-214ENST00000476597 TIGITQ495A1 244 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 NMSQ5H8A3 153 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 MCFD2Q8NI22 146 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 RNASEH2CQ8TDP1 164 aaKnown RBP7.94□□□□□ -1.14
SEC13-214ENST00000476597 TMEM170AQ8WVE7 144 aa7.94□□□□□ -1.14
SEC13-214ENST00000476597 METTL26Q96S19 204 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms