RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 IGHV3OR16-8A0A075B7F1 116 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 SCGB2A1O75556 95 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 YIF1AO95070 293 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
COL1A1-205ENST00000476387 CD7P09564 240 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 OPRK1P41145 380 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 HTR2BP41595 481 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
COL1A1-205ENST00000476387 ANKRD55Q3KP44 614 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 TMEM128Q5BJH2 165 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 OR52B4Q8NGK2 314 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
COL1A1-205ENST00000476387 RYR2Q92736 4967 aa12.15□□□□□ -0.46
COL1A1-205ENST00000476387 K7EMT4 169 aa12.15□□□□□ -0.46
COL1A1-205ENST00000476387 ZNF207O43670 478 aaKnown RBP12.15□□□□□ -0.46
COL1A1-205ENST00000476387 NXPH3O95157 252 aa12.15□□□□□ -0.46
COL1A1-205ENST00000476387 VAMP1P23763 118 aa12.15□□□□□ -0.46
COL1A1-205ENST00000476387 LCE6AA0A183 80 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 RPS10-NUDT3A0A1W2PQS6 291 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 OR11H12B2RN74 326 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 CCR6P51684 374 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 SMCO1Q147U7 214 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
COL1A1-205ENST00000476387 NMSQ5H8A3 153 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 PVRIGQ6DKI7 326 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 ZFAND6Q6FIF0 208 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 LAMTOR1Q6IAA8 161 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 LYZL2Q7Z4W2 148 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 CENPSQ8N2Z9 138 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 SLC24A4Q8NFF2 622 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 GINS3Q9BRX5 216 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 HIPK2Q9H2X6 1198 aa12.14□□□□□ -0.47
COL1A1-205ENST00000476387 DUXBA0A1W2PPF3 345 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 NAP1L6A6NFF2 107 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 BSXQ3C1V8 233 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 NOXA1Q86UR1 476 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 OR1S1Q8NH92 325 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 SPAG8Q99932 426 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-205ENST00000476387 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 STARD9Q9P2P6 4700 aa12.13□□□□□ -0.47
COL1A1-205ENST00000476387 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
COL1A1-205ENST00000476387 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
COL1A1-205ENST00000476387 CENPXA8MT69 81 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
COL1A1-205ENST00000476387 NPY1RP25929 384 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 BMI1P35226 326 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 TNFRSF9Q07011 255 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 BAK1Q16611 211 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 ZNF600Q6ZNG1 722 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 TMEM116Q8NCL8 245 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 LYSTQ99698 3801 aa12.12□□□□□ -0.47
COL1A1-205ENST00000476387 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-205ENST00000476387 IGHV7-4-1A0A0J9YVY3 117 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 A0A1B0GU03 582 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 LINC00854A0A1B0GVQ3 168 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 TSPAN4O14817 238 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 CLN5O75503 358 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 PPP1R1AQ13522 171 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 OR4X1Q8NH49 305 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 RNASEH2CQ8TDP1 164 aaKnown RBP12.11□□□□□ -0.47
COL1A1-205ENST00000476387 DTD1Q8TEA8 209 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 HSPB7Q9UBY9 170 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 SMPXQ9UHP9 88 aa12.11□□□□□ -0.47
COL1A1-205ENST00000476387 PUS1Q9Y606 427 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL1A1-205ENST00000476387 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 TRAV14DV4A0A0A6YYC5 116 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 SFT2D2O95562 160 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 TMEM50AO95807 157 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 IFNA10P01566 189 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
COL1A1-205ENST00000476387 TOMM20LQ6UXN7 152 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 C7orf50Q9BRJ6 194 aaKnown RBP12.1□□□□□ -0.47
COL1A1-205ENST00000476387 RHPN1-AS1Q9BWJ2 59 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 RETNQ9HD89 108 aa12.1□□□□□ -0.47
COL1A1-205ENST00000476387 TRAV30A0A087WSZ9 112 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 OR4C46A6NHA9 309 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 CHEK1O14757 476 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 SLC25A4P12235 298 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 IL7P13232 177 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 ETFRF1Q6IPR1 90 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 LRTM2Q8N967 370 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 ZNF414Q96IQ9 312 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 RBKSQ9H477 322 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 MRPL36Q9P0J6 103 aaKnown RBP12.09□□□□□ -0.47
COL1A1-205ENST00000476387 TMED3Q9Y3Q3 217 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 U3KQ87 197 aa12.09□□□□□ -0.47
COL1A1-205ENST00000476387 NDUFB6O95139 128 aa12.08□□□□□ -0.48
COL1A1-205ENST00000476387 RND2P52198 227 aa12.08□□□□□ -0.48
COL1A1-205ENST00000476387 MLANAQ16655 118 aa12.08□□□□□ -0.48
COL1A1-205ENST00000476387 RNF2Q99496 336 aa12.08□□□□□ -0.48
COL1A1-205ENST00000476387 SDHCQ99643 169 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-205ENST00000476387 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms