RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 P2RY1P47900 373 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
CDRT1-205ENST00000475944 EIF2B2P49770 351 aaKnown RBP7.86□□□□□ -1.15
CDRT1-205ENST00000475944 RND3P61587 244 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 IZUMO4Q1ZYL8 232 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 PVRIGQ6DKI7 326 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 Q6ZTC4 211 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 LINC00336Q6ZUF6 198 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 SNX29P2Q8IUI4 249 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 TMEM230Q96A57 120 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 ZNF486Q96H40 463 aaPredicted RBP7.86□□□□□ -1.15
CDRT1-205ENST00000475944 ENY2Q9NPA8 101 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 DNAH10Q8IVF4 4471 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 CLN5O75503 358 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 IGKV1-5P01602 117 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 APOA1P02647 267 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 RNASE2P10153 161 aaKnown RBP7.85□□□□□ -1.15
CDRT1-205ENST00000475944 C4BPBP20851 252 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 LSM3P62310 102 aaKnown RBP7.85□□□□□ -1.15
CDRT1-205ENST00000475944 OR4X1Q8NH49 305 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 RNF126Q9BV68 326 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 COMMD3Q9UBI1 195 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 TBC1D24Q9ULP9 559 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 HECTD4Q9Y4D8 3996 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 HERC2O95714 4834 aa7.85□□□□□ -1.15
CDRT1-205ENST00000475944 TRAV30A0A087WSZ9 112 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 A0A0B4J293 547 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 HELTA6NFD8 242 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 KNCNA6PVL3 124 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 M0QYG6 137 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 P0C879 139 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 RPL5P46777 297 aaKnown RBP7.84□□□□□ -1.15
CDRT1-205ENST00000475944 PPP5CP53041 499 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 PIGPP57054 158 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 RNASE10Q5GAN6 216 aaKnown RBP7.84□□□□□ -1.15
CDRT1-205ENST00000475944 ACTL10Q5JWF8 245 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 DCANP1Q8TF63 244 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 RRNAD1Q96FB5 475 aaKnown RBP7.84□□□□□ -1.15
CDRT1-205ENST00000475944 TP53RKQ96S44 253 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 FNDC4Q9H6D8 234 aaPredicted RBP7.84□□□□□ -1.15
CDRT1-205ENST00000475944 VCX3AQ9NNX9 186 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 X6R8D5 127 aa7.84□□□□□ -1.15
CDRT1-205ENST00000475944 ELOA3CA0A087WX78 387 aaPredicted RBP7.83□□□□□ -1.16
CDRT1-205ENST00000475944 C3orf85A0A1B0GTC6 90 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 RPS10-NUDT3A0A1W2PQS6 291 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 AMBPP02760 352 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 PI3P19957 117 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 ETV6P41212 452 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 AP2S1P53680 142 aaPredicted RBP7.83□□□□□ -1.16
CDRT1-205ENST00000475944 NUTF2P61970 127 aaKnown RBP7.83□□□□□ -1.16
CDRT1-205ENST00000475944 DHRS2Q13268 280 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 TRIM16LQ309B1 348 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 ARRDC1Q8N5I2 433 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 CSNK1G2-AS1Q8NCQ2 148 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 RNASE11Q8TAA1 199 aaKnown RBP7.83□□□□□ -1.16
CDRT1-205ENST00000475944 YIPF6Q96EC8 236 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 C1QTNF4Q9BXJ3 329 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 CLEC5AQ9NY25 188 aa7.83□□□□□ -1.16
CDRT1-205ENST00000475944 MRPL36Q9P0J6 103 aaKnown RBP7.83□□□□□ -1.16
CDRT1-205ENST00000475944 DEFB131BA0A096LNP1 70 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 B3GALNT1O75752 331 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 IGKV1-17P01599 117 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 HNRNPCP07910 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDRT1-205ENST00000475944 P0DMU3 169 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 FAM231AP0DMU4 169 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 FAM231CP0DMU5 169 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 TBPP20226 339 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 HTR2BP41595 481 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 SNRPD3P62318 126 aaKnown RBP7.82□□□□□ -1.16
CDRT1-205ENST00000475944 BSXQ3C1V8 233 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 TIGITQ495A1 244 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 PSMG4Q5JS54 123 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 LHFPL1Q86WI0 220 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 CCDC71LQ8N9Z2 235 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 ZFAND1Q8TCF1 268 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 Q8WTZ3 238 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 RAB40CQ96S21 281 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 COPZ2Q9P299 210 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 CELA1Q9UNI1 258 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 VPS13DQ5THJ4 4388 aa7.82□□□□□ -1.16
CDRT1-205ENST00000475944 HPGDSO60760 199 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 SLC25A4P12235 298 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 ELK1P19419 428 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 UCP1P25874 307 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 NPY1RP25929 384 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 SPCS3P61009 180 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 MLANAQ16655 118 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 C12orf74Q32Q52 190 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 SP6Q3SY56 376 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 C16orf54Q6UWD8 224 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 FAM219AQ8IW50 185 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 POM121L12Q8N7R1 296 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 OR1S2Q8NGQ3 325 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 GLMPQ8WWB7 406 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 NDUFAF3Q9BU61 184 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 KLK11Q9UBX7 282 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 U3KQE9 123 aa7.81□□□□□ -1.16
CDRT1-205ENST00000475944 A0A087WXM4 84 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 A0A0G2JRQ6 117 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms