RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 TMEM56Q96MV1 263 aa7.55□□□□□ -1.2
CALD1-217ENST00000475772 FXYD6Q9H0Q3 95 aa7.55□□□□□ -1.2
CALD1-217ENST00000475772 MS4A6AQ9H2W1 248 aa7.55□□□□□ -1.2
CALD1-217ENST00000475772 DIABLOQ9NR28 239 aa7.55□□□□□ -1.2
CALD1-217ENST00000475772 PRNDQ9UKY0 176 aa7.55□□□□□ -1.2
CALD1-217ENST00000475772 RAB26Q9ULW5 256 aa7.55□□□□□ -1.2
CALD1-217ENST00000475772 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
CALD1-217ENST00000475772 IGHV3-66A0A0C4DH42 116 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 A0A1B0GU03 582 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 GPR31O00270 319 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 XRCC3O43542 346 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 HERV-K104P61576 105 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 PVRIGQ6DKI7 326 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 ZNF114Q8NC26 417 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 HRH4Q9H3N8 390 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 FKBP11Q9NYL4 201 aa7.54□□□□□ -1.2
CALD1-217ENST00000475772 TRAV2A0A0B4J234 112 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 IGHV4-28A0A0C4DH34 117 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 ZNF705EA8MWA4 302 aaPredicted RBP7.53□□□□□ -1.2
CALD1-217ENST00000475772 C11orf94C9JXX5 98 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 ST8SIA3O43173 380 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 TMEM50AO95807 157 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 HLA-DMBP28068 263 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 HSPA13P48723 471 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 HSPE1P61604 102 aaKnown RBP7.53□□□□□ -1.2
CALD1-217ENST00000475772 PRCDQ00LT1 54 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 IZUMO4Q1ZYL8 232 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 Q6ZTC4 211 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 TRPT1Q86TN4 253 aaKnown RBP7.53□□□□□ -1.2
CALD1-217ENST00000475772 CSNK1G2-AS1Q8NCQ2 148 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 CLRN3Q8NCR9 226 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 DUSP18Q8NEJ0 188 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 FCGR1BQ92637 280 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 BORCS5Q969J3 196 aa7.53□□□□□ -1.2
CALD1-217ENST00000475772 FAM212BQ9NTI7 297 aaPredicted RBP7.53□□□□□ -1.2
CALD1-217ENST00000475772 MRPL36Q9P0J6 103 aaKnown RBP7.53□□□□□ -1.2
CALD1-217ENST00000475772 LOC100506127A0A0U1RQW1 187 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 K7EQG2 157 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 DNASE2O00115 360 aaPredicted RBP7.52□□□□□ -1.21
CALD1-217ENST00000475772 GNG7O60262 68 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 C4BPBP20851 252 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 PAFAH1B2P68402 229 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 SPINK9Q5DT21 86 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 TBC1D26Q86UD7 250 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 PINX1Q96BK5 328 aaKnown RBP7.52□□□□□ -1.21
CALD1-217ENST00000475772 CMTM3Q96MX0 182 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 TSC22D3Q99576 134 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 SCRT1Q9BWW7 348 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 KRTAP9-3Q9BYQ3 159 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 IFT46Q9NQC8 304 aa7.52□□□□□ -1.21
CALD1-217ENST00000475772 PUS1Q9Y606 427 aaKnown RBP eCLIP7.52□□□□□ -1.21
CALD1-217ENST00000475772 IGHV4-4A0A075B6R2 117 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 KNCNA6PVL3 124 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 CD5P06127 495 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 P0C879 139 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 HLA-DMAP28067 261 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 HRH1P35367 487 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 RPS19P39019 145 aaKnown RBP7.51□□□□□ -1.21
CALD1-217ENST00000475772 PPP5CP53041 499 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 TAS2R20P59543 309 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 ZNF600Q6ZNG1 722 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 LINC00336Q6ZUF6 198 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 STHQ8IWL8 128 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 CMTM1Q8IZ96 169 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 TSPAN14Q8NG11 270 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 OR5H2Q8NGV7 314 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 OR6F1Q8NGZ6 308 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 DCANP1Q8TF63 244 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 S100A16Q96FQ6 103 aaKnown RBP7.51□□□□□ -1.21
CALD1-217ENST00000475772 YTHDF1Q9BYJ9 559 aaKnown RBP7.51□□□□□ -1.21
CALD1-217ENST00000475772 VCX3BQ9H321 246 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
CALD1-217ENST00000475772 CLEC5AQ9NY25 188 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 CELA1Q9UNI1 258 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 HSPG2P98160 4391 aa7.51□□□□□ -1.21
CALD1-217ENST00000475772 LRP1BQ9NZR2 4599 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 TRAV10A0A0B4J240 114 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 A0A0B4J293 547 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 INS-IGF2F8WCM5 200 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 RTL8CO15255 209 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 TMEM127O75204 238 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
CALD1-217ENST00000475772 MIFP14174 115 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 CRYBB3P26998 211 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 NPBWR1P48145 328 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 ERHP84090 104 aaKnown RBP7.5□□□□□ -1.21
CALD1-217ENST00000475772 C12orf74Q32Q52 190 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 Q6ZSN1 163 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 ZNF767PQ75MW2 155 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 H2BFWTQ7Z2G1 175 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 OR4A16Q8NH70 328 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 GPX8Q8TED1 209 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 MRGPRFQ96AM1 343 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 GINS3Q9BRX5 216 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 RABAC1Q9UI14 185 aa7.5□□□□□ -1.21
CALD1-217ENST00000475772 NACAE9PAV3 2078 aa7.49□□□□□ -1.21
CALD1-217ENST00000475772 IGKV1-5P01602 117 aa7.49□□□□□ -1.21
CALD1-217ENST00000475772 EIF4EP06730 217 aaKnown RBP7.49□□□□□ -1.21
CALD1-217ENST00000475772 PRSS3P35030 304 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms