RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	IFNA4	P05014	189 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	HOXD3	P31249	432 aa	Predicted RBP	7.7	□□□□□ -1.18
DMD-223	ENST00000475732	FCGR2B	P31994	310 aa	Predicted RBP	7.7	□□□□□ -1.18
DMD-223	ENST00000475732	GPR183	P32249	361 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	SLURP1	P55000	103 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	MFAP4	P55083	255 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	RAB11A	P62491	216 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	CYCS	P99999	105 aa	Known RBP	7.7	□□□□□ -1.18
DMD-223	ENST00000475732		Q56UQ5	140 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	ETFRF1	Q6IPR1	90 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	UBAC2	Q8NBM4	344 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	TMEM170A	Q8WVE7	144 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	BSCL2	Q96G97	398 aa	Predicted RBP	7.7	□□□□□ -1.18
DMD-223	ENST00000475732	RAB40C	Q96S21	281 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	TXN2	Q99757	166 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	PSENEN	Q9NZ42	101 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	MGAT4C	Q9UBM8	478 aa		7.7	□□□□□ -1.18
DMD-223	ENST00000475732	PAIP2B	Q9ULR5	123 aa	Known RBP	7.7	□□□□□ -1.18
DMD-223	ENST00000475732	STRAP	Q9Y3F4	350 aa	Known RBP	7.7	□□□□□ -1.18
DMD-223	ENST00000475732	LSM5	Q9Y4Y9	91 aa	Known RBP	7.7	□□□□□ -1.18
DMD-223	ENST00000475732	OR2T8	A6NH00	312 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732		A6NJY4	79 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	C15orf62	A8K5M9	175 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	OVOL1	O14753	267 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	TGOLN2	O43493	480 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	GNG7	O60262	68 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	IGHV3-48	P01763	117 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	NPBWR1	P48145	328 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	TAS2R30	P59541	319 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	S100A10	P60903	97 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	IL15RA	Q13261	267 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	SPANXN5	Q5MJ07	72 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	ACSM6	Q6P461	480 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	SPSB3	Q6PJ21	355 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	DCUN1D4	Q92564	292 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	DLX4	Q92988	240 aa	Predicted RBP	7.69	□□□□□ -1.18
DMD-223	ENST00000475732	RCC1L	Q96I51	464 aa	Known RBP	7.69	□□□□□ -1.18
DMD-223	ENST00000475732	SMIM8	Q96KF7	97 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	MCRIP2	Q9BUT9	160 aa	Known RBP	7.69	□□□□□ -1.18
DMD-223	ENST00000475732	NMES1	Q9C002	83 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	MED28	Q9H204	178 aa		7.69	□□□□□ -1.18
DMD-223	ENST00000475732	FNDC4	Q9H6D8	234 aa	Predicted RBP	7.69	□□□□□ -1.18
DMD-223	ENST00000475732	RCL1	Q9Y2P8	373 aa	Known RBP	7.69	□□□□□ -1.18
DMD-223	ENST00000475732		F8W735	103 aa	Predicted RBP	7.68	□□□□□ -1.18
DMD-223	ENST00000475732		H3BP45	60 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732		K7EPK0	472 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732		L7N2F9	121 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	TSC22D2	O75157	780 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	SCGB2A1	O75556	95 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	OR2C1	O95371	312 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	TMEM50A	O95807	157 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	SLC25A4	P12235	298 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	PVALB	P20472	110 aa	Predicted RBP	7.68	□□□□□ -1.18
DMD-223	ENST00000475732	H2BFS	P57053	126 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	VAMP2	P63027	116 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	CD69	Q07108	199 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	RAB32	Q13637	225 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	KLF5	Q13887	457 aa	Predicted RBP	7.68	□□□□□ -1.18
DMD-223	ENST00000475732	MLANA	Q16655	118 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	FAM106A	Q4KMX7	169 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	SAMD5	Q5TGI4	173 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	C1QL4	Q86Z23	238 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	OR4X1	Q8NH49	305 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	OR4C12	Q96R67	309 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	ZC4H2	Q9NQZ6	224 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	CMYA5	Q8N3K9	4069 aa		7.68	□□□□□ -1.18
DMD-223	ENST00000475732	NUPL2	O15504	423 aa	Known RBP	7.67	□□□□□ -1.18
DMD-223	ENST00000475732	CLN5	O75503	358 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	RLN2	P04090	185 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	CTSG	P08311	255 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	IGLL1	P15814	213 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	GPX4	P36969	197 aa	Predicted RBP	7.67	□□□□□ -1.18
DMD-223	ENST00000475732	PAX9	P55771	341 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	SYNJ2BP	P57105	145 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	PRSS54	Q6PEW0	395 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	SLC16A13	Q7RTY0	426 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	GPHB5	Q86YW7	130 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	TMEM116	Q8NCL8	245 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	CACNG8	Q8WXS5	425 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	CHRDL1	Q9BU40	450 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	GPR61	Q9BZJ8	451 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	NOTCH3	Q9UM47	2321 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	MGAM2	Q2M2H8	2515 aa		7.67	□□□□□ -1.18
DMD-223	ENST00000475732	TRAV30	A0A087WSZ9	112 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	IGHV3-35	A0A0C4DH35	117 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	SEC14L6	B5MCN3	397 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	LGALS9	O00182	355 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	NDUFA4	O00483	81 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	CXCL3	P19876	107 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	ADM	P35318	185 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	BCAP31	P51572	246 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	RND2	P52198	227 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	RRAS2	P62070	204 aa	Predicted RBP	7.66	□□□□□ -1.18
DMD-223	ENST00000475732	REL	Q04864	619 aa	Predicted RBP	7.66	□□□□□ -1.18
DMD-223	ENST00000475732	C9orf66	Q5T8R8	295 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	TMEM14EP	Q6UXP3	125 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	OR9G4	Q8NGQ1	327 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	SLC35E1	Q96K37	410 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	ELOVL1	Q9BW60	279 aa		7.66	□□□□□ -1.18
DMD-223	ENST00000475732	MRPL36	Q9P0J6	103 aa	Known RBP	7.66	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms