RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 SSBP4Q9BWG4 385 aaPredicted RBP11.96□□□□□ -0.5
SSPO-205ENST00000475488 PTPRFP10586 1907 aa11.96□□□□□ -0.5
SSPO-205ENST00000475488 GBF1Q92538 1859 aa11.96□□□□□ -0.5
SSPO-205ENST00000475488 FREM3P0C091 2139 aa11.96□□□□□ -0.5
SSPO-205ENST00000475488 ZNF562Q6V9R5 426 aa11.96□□□□□ -0.5
SSPO-205ENST00000475488 TMEM219Q86XT9 240 aa11.96□□□□□ -0.5
SSPO-205ENST00000475488 C2orf68Q2NKX9 166 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 VMO1Q7Z5L0 202 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 FAM186AA6NE01 2351 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 KLF4O43474 513 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 ELF5Q9UKW6 265 aaPredicted RBP11.95□□□□□ -0.5
SSPO-205ENST00000475488 CACNA1DQ01668 2161 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 LIMS1P48059 325 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 CTAG1AP78358 180 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 C9orf106Q8NAJ2 232 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 SLC25A38Q96DW6 304 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 CXorf65A6NEN9 183 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 SIGLEC5O15389 551 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 LY75O60449 1722 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 ZNF883P0CG24 379 aa11.95□□□□□ -0.5
SSPO-205ENST00000475488 SIRT4Q9Y6E7 314 aaPredicted RBP11.95□□□□□ -0.5
SSPO-205ENST00000475488 PGPEP1LA6NFU8 196 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 TMEM133Q9H2Q1 129 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 CCL3L1P16619 93 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 LCNL1Q6ZST4 164 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 LINC00587B1AMM8 73 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 ACTL10Q5JWF8 245 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 FAM90A1Q86YD7 464 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 MRPS18AQ9NVS2 196 aaKnown RBP11.94□□□□□ -0.5
SSPO-205ENST00000475488 LYNX1G3V0Z9 82 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 DPM2O94777 84 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 LYNX1P0DP58 116 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 PPIFP30405 207 aaKnown RBP11.94□□□□□ -0.5
SSPO-205ENST00000475488 LGALS1P09382 135 aaKnown RBP11.94□□□□□ -0.5
SSPO-205ENST00000475488 GNG5P63218 68 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 ZNF600Q6ZNG1 722 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 LTBP4Q8N2S1 1624 aa11.94□□□□□ -0.5
SSPO-205ENST00000475488 TMEM8BA6NDV4 472 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 C17orf98A8MV24 154 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 ERCC8Q13216 396 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 TSC2P49815 1807 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 IZUMO1RA6ND01 250 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
SSPO-205ENST00000475488 A0A0G2JMM0 328 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 A0A1W2PPB8 328 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 A0A1W2PRS3 328 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 KIR3DP1A8MWS1 328 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 IQCF6A8MYZ5 107 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 OVOL1O14753 267 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 ST6GALNAC3Q8NDV1 305 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 COL18A1P39060 1754 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 DANCRP0C864 163 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 RNF125Q96EQ8 232 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 WDYHV1Q96HA8 205 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 C8orf82Q6P1X6 216 aaPredicted RBP11.93□□□□□ -0.5
SSPO-205ENST00000475488 ZNF48Q96MX3 618 aaPredicted RBP11.93□□□□□ -0.5
SSPO-205ENST00000475488 ANAPC10Q9UM13 185 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 LRRK1Q38SD2 2015 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 TRAV41A0A0B4J266 112 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 C12orf77C9JDV5 145 aa11.93□□□□□ -0.5
SSPO-205ENST00000475488 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
SSPO-205ENST00000475488 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 MYLKQ15746 1914 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 GNLYP22749 145 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 SS18Q15532 418 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 A0A1B0GV90 55 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.92□□□□□ -0.5
SSPO-205ENST00000475488 PLA2G10O15496 165 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 CTSBP07858 339 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 ORMDL2Q53FV1 153 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 PHF3Q92576 2039 aaKnown RBP11.92□□□□□ -0.5
SSPO-205ENST00000475488 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 DLX4Q92988 240 aaPredicted RBP11.92□□□□□ -0.5
SSPO-205ENST00000475488 RPL36AP83881 106 aaKnown RBP11.92□□□□□ -0.5
SSPO-205ENST00000475488 RPL36ALQ969Q0 106 aaKnown RBP11.92□□□□□ -0.5
SSPO-205ENST00000475488 PLXND1Q9Y4D7 1925 aa11.92□□□□□ -0.5
SSPO-205ENST00000475488 C15orf61A6NNL5 157 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 E9PQ18 207 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 ITGB1BP1O14713 200 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 GATA2P23769 480 aaPredicted RBP11.91□□□□□ -0.5
SSPO-205ENST00000475488 PSG7Q13046 419 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 IRF3Q14653 427 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 UBE2E2Q96LR5 201 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 HLA-DQB1P01920 261 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 ZNF250P15622 560 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 C1QL2Q7Z5L3 287 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 DOCK4Q8N1I0 1966 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 SRSF4Q08170 494 aaKnown RBP11.91□□□□□ -0.5
SSPO-205ENST00000475488 C6orf226Q5I0X4 101 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
SSPO-205ENST00000475488 C1QTNF4Q9BXJ3 329 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 E9PLN8 166 aa11.91□□□□□ -0.5
SSPO-205ENST00000475488 CHCHD2Q9Y6H1 151 aaPredicted RBP11.91□□□□□ -0.5
SSPO-205ENST00000475488 A0A0G2JK05 382 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms