RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 IGKV6D-41A0A0C4DH26 115 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 H0YIG0 161 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 M0R2P5 195 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 CHST1O43916 411 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 RPL35AP18077 110 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 OPRK1P41145 380 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 IER3P46695 156 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 RPL34P49207 117 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 HERVK_113P63121 156 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 PHLDA2Q53GA4 152 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 FRG2Q64ET8 278 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 LCN10Q6JVE6 187 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 Q6ZT83 130 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 GOLT1AQ6ZVE7 132 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 SSX8Q7RTT4 187 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 ANKRD37Q7Z713 158 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 TEN1Q86WV5 123 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 FGFRL1Q8N441 504 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 NPWQ8N729 165 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 SAP25Q8TEE9 199 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 CHCHD1Q96BP2 118 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 LINC00477Q96M19 166 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF488Q96MN9 340 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 SLC25A39Q9BZJ4 359 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 FBXL15Q9H469 300 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 C21orf62Q9NYP8 219 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 HIGD1BQ9P298 99 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 LY96Q9Y6Y9 160 aa4.87□□□□□ -1.63
ECHDC1-215ENST00000475319 CCDC88CQ9P219 2028 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 COL11A1P12107 1806 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 MKI67P46013 3256 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 CENPFP49454 3210 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 CGB1A6NKQ9 187 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 K7ENP7 123 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 NCR2O95944 276 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 CECR9P0C854 216 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 MPV17P39210 176 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 INSL3P51460 131 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 TMEM258P61165 79 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 FAM53BQ14153 422 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 C4orf26Q17RF5 130 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 TEX45Q8NA69 505 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 GATD1Q8NB37 220 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 H1FXQ92522 213 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 PLEKHB2Q96CS7 222 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 LINC00526Q96FQ7 95 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 TIMD4Q96H15 378 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 LINC00479Q96M42 142 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 KXD1Q9BQD3 176 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 TMEM204Q9BSN7 226 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 PBOV1Q9GZY1 135 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 CXCL16Q9H2A7 254 aa4.86□□□□□ -1.63
ECHDC1-215ENST00000475319 ANKRD36A6QL64 1941 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 A0A0A6YYD5 115 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 hDV102S1A0JD36 115 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 RBP4P02753 201 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 SLPIP03973 132 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 FGF6P10767 208 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 HOXD9P28356 352 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 PEBP1P30086 187 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 PPP1CAP62136 330 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 DPTQ07507 201 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 CFAP126Q5VTH2 177 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 HRCT1Q6UXD1 115 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 TRPT1Q86TN4 253 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 WIPF2Q8TF74 440 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 C11orf1Q9H5F2 150 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 ZNF286AQ9HBT8 521 aa4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 CHCHD2Q9Y6H1 151 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-215ENST00000475319 PIGBOS1A0A0B4J2F0 54 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 FAM24AA6NFZ4 105 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 CRYM-AS1A6NIL9 109 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 IGLL5B9A064 214 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 BMPR1BO00238 502 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 DPM2O94777 84 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 IGHG1P01857 330 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 IGHMP01871 453 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 NBL1P41271 181 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 SGSHP51688 502 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 TMEM50BP56557 158 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 PFN3P60673 137 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 ADORA2A-AS1P86434 159 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 HOXA4Q00056 320 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 SLC38A11Q08AI6 406 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 KLF17Q5JT82 389 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 LINC01545Q5VT33 79 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 Q5XG85 94 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 HSD11B1LQ7Z5J1 315 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 MOB3BQ86TA1 216 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 FAM19A2Q8N3H0 131 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 TMEM252Q8N6L7 170 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 NUP35Q8NFH5 326 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 OR5C1Q8NGR4 320 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 PHLDA1Q8WV24 401 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 IMUPQ9GZP8 106 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 JPT2Q9H910 190 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 PELI2Q9HAT8 420 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 FZR1Q9UM11 496 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms