RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 DCUN1D4Q92564 292 aa7.76□□□□□ -1.17
COL8A1-206ENST00000474648 USMG5Q96IX5 58 aa7.76□□□□□ -1.17
COL8A1-206ENST00000474648 THYN1Q9P016 225 aa7.76□□□□□ -1.17
COL8A1-206ENST00000474648 PAIP2BQ9ULR5 123 aaKnown RBP7.76□□□□□ -1.17
COL8A1-206ENST00000474648 TNFSF18Q9UNG2 199 aa7.76□□□□□ -1.17
COL8A1-206ENST00000474648 FXYD6-FXYD2A0A087WZ82 144 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 RNF222A6NCQ9 220 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 FAM223BA6NKX1 122 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 HMSDA8MTL9 139 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 F8W735 103 aaPredicted RBP7.75□□□□□ -1.17
COL8A1-206ENST00000474648 CORTO00230 105 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 CYB5BO43169 146 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 C1QBP02746 253 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 EXOSC2Q13868 293 aaKnown RBP7.75□□□□□ -1.17
COL8A1-206ENST00000474648 C15orf32Q32M92 178 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 OR8G2PQ6IF36 304 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 C18orf65Q6ZTR6 163 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 FAM223AQ8IWN6 122 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 C11orf44Q8N8P7 122 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 OR4X2Q8NGF9 303 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 ZNF502Q8TBZ5 544 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 CACNG8Q8WXS5 425 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 PINX1Q96BK5 328 aaKnown RBP7.75□□□□□ -1.17
COL8A1-206ENST00000474648 UBE2E2Q96LR5 201 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 AQP10Q96PS8 301 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 CITED2Q99967 270 aaPredicted RBP7.75□□□□□ -1.17
COL8A1-206ENST00000474648 SLC25A31Q9H0C2 315 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 GNB4Q9HAV0 340 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 S4R3C0 116 aa7.75□□□□□ -1.17
COL8A1-206ENST00000474648 A0A0G2JLM5 398 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 TCRBV4S1A1TA0A5B7 111 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 IGHV3-11P01762 117 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 IGHV3-23P01764 117 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 CDX1P47902 265 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-206ENST00000474648 GAMTQ14353 236 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 ZNF343Q6P1L6 599 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 TMEM217Q8N7C4 229 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 TMEM116Q8NCL8 245 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 OR10P1Q8NGE3 313 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 CXorf58Q96LI9 332 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 CITED1Q99966 193 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 WFDC1Q9HC57 220 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 C21orf62Q9NYP8 219 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 HSPB11Q9Y547 144 aa7.74□□□□□ -1.17
COL8A1-206ENST00000474648 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.73□□□□□ -1.17
COL8A1-206ENST00000474648 RPS10-NUDT3A0A1W2PQS6 291 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 I3L521 148 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 PFDN1O60925 122 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 TRBV12-3P01733 135 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 CLEC3BP05452 202 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 CXCL2P19875 107 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 S100A11P31949 105 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 FCGR2BP31994 310 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-206ENST00000474648 OPRK1P41145 380 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 MFAP4P55083 255 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 DLK1P80370 383 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 BAXQ07812 192 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 SLC38A11Q08AI6 406 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 ACOT7LQ6ZUV0 252 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 SLC16A13Q7RTY0 426 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 STX12Q86Y82 276 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 OR4X1Q8NH49 305 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 NPIPB3Q92617 1050 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 EEF1AKMT3Q96AZ1 226 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 ZNF414Q96IQ9 312 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 CCDC140Q96MF4 163 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 OR5B12Q96R08 314 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 ZNF747Q9BV97 191 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 GGACTQ9BVM4 153 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 MFFQ9GZY8 342 aa7.73□□□□□ -1.17
COL8A1-206ENST00000474648 TSSC4Q9Y5U2 329 aaPredicted RBP7.73□□□□□ -1.17
COL8A1-206ENST00000474648 TRBV7-1A0A0A6YYK4 115 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 FNDC10F2Z333 226 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 ARPC5O15511 151 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 CLN5O75503 358 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 CTSGP08311 255 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 ADMP35318 185 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 NUP62P37198 522 aaPredicted RBP7.72□□□□□ -1.17
COL8A1-206ENST00000474648 RND2P52198 227 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 RIPPLY3P57055 190 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 RUNX1Q01196 453 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 ATP6V1FQ16864 119 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 VWC2Q2TAL6 325 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 LGALSLQ3ZCW2 172 aaPredicted RBP7.72□□□□□ -1.17
COL8A1-206ENST00000474648 LAMTOR1Q6IAA8 161 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 ETFRF1Q6IPR1 90 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 ACSM6Q6P461 480 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 CLEC19AQ6UXS0 136 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 INO80EQ8NBZ0 244 aaPredicted RBP7.72□□□□□ -1.17
COL8A1-206ENST00000474648 OR1S2Q8NGQ3 325 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 OR5C1Q8NGR4 320 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 HYLS1Q96M11 299 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 ATP6V0BQ99437 205 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 TXN2Q99757 166 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 STAB1Q9NY15 2570 aa7.72□□□□□ -1.17
COL8A1-206ENST00000474648 IGKV1D-37A0A075B6S9 117 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 IGKV1OR2-108A0A075B7D4 117 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 ANKRD34BA5PLL1 514 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms