RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 CENPSQ8N2Z9 138 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 OR52B4Q8NGK2 314 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 RCHY1Q96PM5 261 aa12.02□□□□□ -0.49
ITGB1-210ENST00000474568 OR11H12B2RN74 326 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 CORTO00230 105 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 SFT2D2O95562 160 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 HTR2BP41595 481 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 BSXQ3C1V8 233 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 PVRIGQ6DKI7 326 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 SLC24A4Q8NFF2 622 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 OR1S1Q8NH92 325 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 DEDD2Q8WXF8 326 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 RBKSQ9H477 322 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 ZMAT4Q9H898 229 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 SRD5A3Q9H8P0 318 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 FLVCR2Q9UPI3 526 aa12.01□□□□□ -0.49
ITGB1-210ENST00000474568 A8MZ25 164 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 TMEM50AO95807 157 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 IL7P13232 177 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 TNFRSF9Q07011 255 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 RBMS2Q15434 407 aaKnown RBP12□□□□□ -0.49
ITGB1-210ENST00000474568 HAGHQ16775 308 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 SLC16A13Q7RTY0 426 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 TMEM170AQ8WVE7 144 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 HIPK2Q9H2X6 1198 aa12□□□□□ -0.49
ITGB1-210ENST00000474568 IGKV3-7A0A075B6H7 116 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 IGHV7-4-1A0A0J9YVY3 117 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 NAP1L6A6NFF2 107 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 C15orf62A8K5M9 175 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 K7EMT4 169 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 IFNA10P01566 189 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 HOXB5P09067 269 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 NPY1RP25929 384 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 C2orf83Q53S99 150 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 TOMM20LQ6UXN7 152 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 TMEM116Q8NCL8 245 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 DTD1Q8TEA8 209 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 RHPN1-AS1Q9BWJ2 59 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 UBQLN2Q9UHD9 624 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 SMPXQ9UHP9 88 aa11.99□□□□□ -0.49
ITGB1-210ENST00000474568 PUS1Q9Y606 427 aaKnown RBP eCLIP11.99□□□□□ -0.49
ITGB1-210ENST00000474568 TRAV14DV4A0A0A6YYC5 116 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 TRAV25A0A0B4J276 109 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 IGHV3-66A0A0C4DH42 116 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 A0A1B0GU03 582 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 RPS10-NUDT3A0A1W2PQS6 291 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 CHEK1O14757 476 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 CLN5O75503 358 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 NDUFB6O95139 128 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 IAPPP10997 89 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 TIGITQ495A1 244 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 LAMTOR1Q6IAA8 161 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 ZNF600Q6ZNG1 722 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 OR4X1Q8NH49 305 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 RNF2Q99496 336 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 TM2D3Q9BRN9 247 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 RETNQ9HD89 108 aa11.98□□□□□ -0.49
ITGB1-210ENST00000474568 RBMY1BA6NDE4 496 aaKnown RBP11.97□□□□□ -0.49
ITGB1-210ENST00000474568 RBMY1EA6NEQ0 496 aaKnown RBP11.97□□□□□ -0.49
ITGB1-210ENST00000474568 CENPXA8MT69 81 aa11.97□□□□□ -0.49
ITGB1-210ENST00000474568 RBMY1DP0C7P1 496 aaKnown RBP11.97□□□□□ -0.49
ITGB1-210ENST00000474568 BTCP35070 178 aa11.97□□□□□ -0.49
ITGB1-210ENST00000474568 TFPI2P48307 235 aa11.97□□□□□ -0.49
ITGB1-210ENST00000474568 RND2P52198 227 aa11.97□□□□□ -0.49
ITGB1-210ENST00000474568 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
ITGB1-210ENST00000474568 DUXBA0A1W2PPF3 345 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 C9orf170A2RU37 121 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 TSPAN4O14817 238 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 APOHP02749 345 aaPredicted RBP11.96□□□□□ -0.49
ITGB1-210ENST00000474568 ANXA7P20073 488 aaKnown RBP11.96□□□□□ -0.49
ITGB1-210ENST00000474568 GGNBP1Q5YKI7 109 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 PRSS54Q6PEW0 395 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 LRTM2Q8N967 370 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.49
ITGB1-210ENST00000474568 ACY3Q96HD9 319 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 SPAG8Q99932 426 aaPredicted RBP11.96□□□□□ -0.49
ITGB1-210ENST00000474568 GINS3Q9BRX5 216 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 MAGT1Q9H0U3 335 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 ZFAND3Q9H8U3 227 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 CACFD1Q9UGQ2 172 aa11.96□□□□□ -0.49
ITGB1-210ENST00000474568 PAIP2BQ9ULR5 123 aaKnown RBP11.96□□□□□ -0.49
ITGB1-210ENST00000474568 PITX3O75364 302 aa11.95□□□□□ -0.5
ITGB1-210ENST00000474568 ADAP1O75689 374 aa11.95□□□□□ -0.5
ITGB1-210ENST00000474568 IFNA4P05014 189 aa11.95□□□□□ -0.5
ITGB1-210ENST00000474568 GBGT1Q8N5D6 347 aa11.95□□□□□ -0.5
ITGB1-210ENST00000474568 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
ITGB1-210ENST00000474568 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
ITGB1-210ENST00000474568 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
ITGB1-210ENST00000474568 PIGBOS1A0A0B4J2F0 54 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 PLA2G10O15496 165 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 SCGB2A1O75556 95 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 IGKV1-17P01599 117 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 OR4E1P0C645 316 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 SLC25A4P12235 298 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 OR10J1P30954 320 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 CNPY1Q3B7I2 92 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms